UFO05514.5prime Sequence
1042 bp (893 high quality bases) assembled on 2009-07-15
> UFO05514.5prime
CAGTCGACATGAGCAGCCAAAAGATTGGGATCGTGGGCAGTGGACTGATC
GGCAGGGCGTGGGCGATGCTCTTTGCAGCAGCTGGCTATCGTGTCCAACT
GTATGACATCCTGGAGAGCCAGTTGGCCACTGCGCTGCAGGAGCTGGACA
AGGATTTGCATCGGCTGGAGGAGCAGAGCGCGTTGCGTGGCAATATACGG
GCCTCGGAACAGTTTGCCCTGATCGGGGTCACCACTCGACTAGAGGAACT
CACCAGGGAGGCGGTGCACATACAGGAGTGTGTTCCCGAAGTTTTGCATC
TGAAGAAGAGTCTGTACTCGCAGTTGGATGAGCTGCTCGAGGAGCAGACA
GTGGTGGCCAGTTCCACGAGCACCTTTATGCCATCGCTGTACAGCGAGGG
TCTGCAAAAGAGACAACAGATGCTAGTGGCTCATCCACTGAACCCGCCGT
ATTTTATACCCCTGGTAGAGATTGTCCCAGCTCCCTGGACATCCCCGAGT
GCGGTGGAGCGAACCCGTGACCTAATGCTCAGCCTGGGCCAACGTCCGGT
AACTTTAAAAAGAGAGATTCAGGGCTTCGCCACCAATCGGATTCAGTATG
CCATTCTGAACGAGGTGTGGCGCCTGGTGGGCTCCGGTATCCTCAGCGTG
GCCGATGTGGATCGAGTTCTCAGCCAGGGCTTGGGATTGCGATATGCCCT
GCTAGGATCCCTGAGACAGCCCATCTGAATGCGCCTGGTGGTGTGGCTGA
CTACTTCCAGCGTTTTGGTGGGGAAATCTCTGCGGTGAGTGCCACCTATG
GAGAGACCCCGAATACCCAGGAGGATCGGGAAACGCTGGCCGAGATTGCA
CGGCAGTGTGAGCAGCTGGTGTCACTGAAAACTCGACGAGAGGCGGGTCG
TCGTGATGATCTCATCACTGCAACTGAGAGCAGTGAGCAGCTTTCTAGAC
ATCGTTGGCCGCGCCCAGTATGGCCTATCTAATCCTAATCTAATCTATCC
ACTAGCTAGGAATCTGCCATGACATGCTGAATCCACAATAAA
UFO05514.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10131-RA | 1058 | CG10131-RA | 7..916 | 4..909 | 4430 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14630383..14630872 | 415..901 | 2320 | 99.2 | Plus |
| 2R | 25286936 | 2R | 14629916..14630331 | 4..419 | 2065 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:26:05 has no hits.
UFO05514.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:25:44 Download gff for
UFO05514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10131-RA | 1..921 | 2..917 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:21 Download gff for
UFO05514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10131-RA | 3..924 | 1..917 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:48 Download gff for
UFO05514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10131-RA | 3..924 | 1..917 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:48 Download gff for
UFO05514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14629912..14630331 | 1..419 | 99 | -> | Plus |
| 2R | 14630388..14630868 | 420..897 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:21 Download gff for
UFO05514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10517417..10517836 | 1..419 | 99 | -> | Plus |
| arm_2R | 10517893..10518373 | 420..897 | 99 | == | Plus |
