UFO05518.5prime Sequence
655 bp (654 high quality bases) assembled on 2009-07-15
> UFO05518.5prime
CAGTCGACATGGCCACCAGCGAGATCTCGAGCTCCAATGAGCGGCACTAC
TACGCCAAACTGGAGGCCATCAAGGACATCAGGGACAAGACGCTGTCGCT
GGAGAAGCTCAAAGTGCGGATCATCAAGGAGGTGAAGCTGAGCGACGACG
AGGAGAAGTGCCTGGAGGAGTACCGCAAGGAGATGGAGCACCTGCTCGAG
GAGAAGATGTCGCACGTGGAAGAGCTGCGCCAGATCCACGCGGACATCAA
CGACATGGAGAACATCATCAAGCAGACGAAGGAGAACCAGACCCGCTCCT
TCGACATGGCCAACCGGGTGTACGAGGAGTACCTGGCCCTGAAGTACCAG
ATTGATCACATGCGCCGCGACTATCTCGGACTAAGCCCGCTGCGAGATCT
GCACGAGGAGGAGGGCAGTCCCATTTCGAAGGATCGCTTCCAGACCAACT
TCCTTAAGGTGGCCGCCCAGTCGGCGGCAGCAGCAGCTGCTGCAGCTGCG
GCGGCGGCCTCGGTTAATCAGAACTCGTCGTTGGCCCGTCCGCATGCCCG
GCATCCTCTGATGCCGGAGGCCACGGTCACCGCGCTGCCTTCTGGCGGCG
GACAGGGCGGCGTTGGTGGTGGCGGCGCTGCAGCGGTGGCGGAGGATCCT
GTTGG
UFO05518.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13001-RA | 1786 | CG13001-RA | 290..930 | 9..648 | 3180 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16941942..16942582 | 648..9 | 3155 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-28 23:26:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 3682..3778 | 642..544 | 138 | 62.6 | Minus |
G5 | 4856 | G5 G5_DM 4856bp | 530..655 | 224..98 | 110 | 55.1 | Minus |
UFO05518.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:25:49 Download gff for
UFO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13001-RA | 273..926 | 1..655 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:26 Download gff for
UFO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13001-RA | 273..926 | 1..655 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:52 Download gff for
UFO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13001-RA | 282..935 | 1..655 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:52 Download gff for
UFO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16941936..16942589 | 1..655 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:26 Download gff for
UFO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16835969..16836622 | 1..655 | 98 | | Minus |