UFO05521.5prime Sequence
987 bp (839 high quality bases) assembled on 2009-07-15
> UFO05521.5prime
CAGTCGACATGTCAGTACGAGACTTTATCAAGGGTCTGCCCATACACGAT
TCGAGCAATTTTACCCATTTGAGCAACGAACATGGAATTCGAACGTCGCA
GAAGCGTGCCTCCGTCTACCTGCCCACCGAGGATGAGCATTCAGAGCAGC
TGATCGTGATGGACAAGCGATGTGTCCTGCTGCGCTACCTCACTCAGCAG
TGGGACAAAAAGACGCTTCAGCGGAAGAGGGAGCACGGCGGCGATTCGGG
AAATGGCAACGGCAACAGCTCCACGCCCAACGGCAACAGCACCAACAGCA
AAAAGCGCCCGCGCTTGGACCCCAACGAGCTGAACGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTGGCCA
CGTTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAA
CATATCTCATAAACCCTTTAGGGAAATAGGCCAGGGTTTCCACCGTACAC
GCCACATCTTGCGATTATTTGTGTAGAAACTGCCGGAAATCGTCGTGGCT
ATCACTCAGAGCGATGAACCGTTCAGTTGCTCATGAAACGTGTTAACAAG
GTGAACACTATCCAATCACAGCCCACCGTCTTTCATG
UFO05521.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31855-RB | 1126 | CG31855-RB | 198..524 | 9..335 | 1635 | 100 | Plus |
| CG31855-RA | 1064 | CG31855-RA | 136..462 | 9..335 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13369401..13369727 | 9..335 | 1635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:57 has no hits.
UFO05521.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:25:50 Download gff for
UFO05521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31855-RB | 202..541 | 1..342 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:31 Download gff for
UFO05521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31855-RA | 129..468 | 1..342 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:50 Download gff for
UFO05521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31855-RA | 129..468 | 1..342 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:50 Download gff for
UFO05521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13369394..13369727 | 1..335 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:31 Download gff for
UFO05521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13369394..13369727 | 1..335 | 98 | == | Plus |
