UFO05537.5prime Sequence
1049 bp (926 high quality bases) assembled on 2009-07-15
> UFO05537.5prime
CAGTCGACATGGAATGTCAGGCTTCAGGAAACCCAAAGAGCGGAGCGGCA
ACCGCCCAATGCGGAGTAAGGGTCGGTGATGATCTTGCCAATGCTCGAGC
CGGAGTATTCGCCTCCACTCCAGGCGCTGGGGGTCCGGTCACCAAGGGAG
TTTATGGAGCGGTCAACGCCAATGGTCATGCACTCTCACTGCAGCATGGC
CACATCGAGGGCGTGGGCAGCACTACCACTGCCGCAGCCCAAGCCAATCT
CTTCCAGAGCAATAACGCCGCTCTGAATGCCACTGCATTTCACAGTCATA
GCCGATCGCACGATCAGTTTGGCGGAGGACTCAATTTGCAAACTGGAACG
GGTCACCAGGCGGCAGTGGGGGTCACTAGGGTTCCTCAGTTCGGCATGAC
CGCCGTCCAGGCTTCTGGCACAGCAAATCTGTATACCTCTCCAAGTGGCA
ATCTCAACCTCAACGCCACCGGAAGTGCCAATCATCACCTCAGGGGACCG
ATGCGCGGCAAGTCCGATTTCGGCACCGGAGTTAACTTGCGATATAATTT
TGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAGCCATCACAAACGGCATGATGACCTGATCGCAGCGGCATCAGCACTGT
CGCTTGCGTATATATTTGCCATGGTGAACGGGGCGAGAGTGTCATATGCC
ACGTTTAATCAACTGTGACTCCACCCAGGATGCTGAACGAAAACTATCTC
ATAACTTTAGGAATAGCAGTTTCACGTACCGCCCAATCTTGGCAATATG
UFO05537.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AttD-RA | 742 | CG7629-RA | 57..599 | 9..551 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17625562..17625943 | 170..551 | 1910 | 100 | Plus |
| 3R | 32079331 | 3R | 17625324..17625484 | 9..169 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:54:24 has no hits.
UFO05537.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:26:13 Download gff for
UFO05537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AttD-RA | 57..608 | 9..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:24 Download gff for
UFO05537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AttD-RA | 57..608 | 9..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:49 Download gff for
UFO05537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AttD-RA | 57..608 | 9..560 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:49 Download gff for
UFO05537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17625324..17625484 | 9..169 | 100 | -> | Plus |
| 3R | 17625562..17625952 | 170..560 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:24 Download gff for
UFO05537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13451046..13451206 | 9..169 | 100 | -> | Plus |
| arm_3R | 13451284..13451674 | 170..560 | 98 | == | Plus |
