UFO05541.5prime Sequence
1076 bp (962 high quality bases) assembled on 2009-07-15
> UFO05541.5prime
CAGTCGACATGCTGAAGCTTACGGTTCTACTAATTACATTGCTGGTCATA
GCAAAAACTGGATGGACTCGCGAAAAGTTCTCCATACAAGTAAACGAAGG
AAATACGTTTGGTGCGCTCGTCAAGGCGGAACCCTTTACCAAAATCAACG
ACGGATACTACTTCTTTGGCACGGAGTCCTTGAACTGGTACGAGGCCTAC
GAGAAATGCCGCGAATTGAACTCTGAGCTGGTCACATTCGAAACGGACCA
GGAGTTCGATGCCGTTACGGCTTTCCTGACGGCCAACGGATCACGGCTGA
CGTACTGGACATCGGGAAACGATCTGGCCAAGACTGGCAGCCACAGATGG
TTCACCAATGCCCAGCGAATTAGTTCGCTCAGGTGGGCAAGGAATCAGCC
GGATAATGCTGGGCAGAAGGAGCACTGCATCCACCTTGGCTATATTTACA
AGGACTCGCGGAAGTTTGAGCTAAACGATAGACCCTGCTCACAGGATCCA
AACAGTTTGTTTAAGTATATATGCGAAGCTCCCGAAATGGAAACCATTTC
CATTGTGGTGTGGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGAAGCCATCACAAACGGCATGATGATCCTGATCGCAGC
GCATCAGCACTGTCGCTTGCGTATATATTTGCCATGTGAAACGGGGCGAT
GAGTTGTCATATTGCCACGTTTAAATCAACTGCGACTCAGCAGGAATGCC
TGAAACAAACATATTCTCATAACTTAAGGAATAGGCAGTTCCCGTAACCG
CCATCTGCATATGGTAGACTGCGAAG
UFO05541.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lectin-galC1-RB | 702 | CG9976-RB | 14..571 | 9..566 | 2790 | 100 | Plus |
| Lectin-galC1-RA | 759 | CG9976-RA | 14..571 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19417618..19418086 | 98..566 | 2345 | 100 | Plus |
| 2L | 23513712 | 2L | 19417460..19417555 | 9..104 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:15 has no hits.
UFO05541.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:26:15 Download gff for
UFO05541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lectin-galC1-RA | 7..571 | 1..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:47 Download gff for
UFO05541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lectin-galC1-RA | 7..571 | 1..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:25 Download gff for
UFO05541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lectin-galC1-RA | 7..571 | 1..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:25 Download gff for
UFO05541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19417453..19417550 | 1..99 | 96 | -> | Plus |
| 2L | 19417620..19418086 | 100..566 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:47 Download gff for
UFO05541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19417453..19417550 | 1..99 | 96 | -> | Plus |
| arm_2L | 19417620..19418086 | 100..566 | 100 | == | Plus |
