UFO05544.5prime Sequence
1035 bp (924 high quality bases) assembled on 2009-07-15
> UFO05544.5prime
CAGTCGACATGGCCCCACTGCATCTGCTGCTCCACTGTGCCACCACTCTG
CTGATTGCCAACGCCCTGGTACTGAGTCCCCAATTACTGGGTGCAGAAAA
TGAGGCCAAATCGAAAGTCGGTTTCCCCATCGACCTGGACGACGGCGTAG
ATGGGGTGGACCTGCCACTGGAGGTGGAACAGGATGTGGCCGGGGACCAG
TCCGCCGGCAGGTCCCTGCACTCCATGCCGCCCGACTGGCTGACCTTCGA
CGAACCCACTCCGGCCACGAAGCATCGGTCTGGCCACAAGCCGCAGATCA
TCCTGAAGCACCCGACCAGCGGATTCCACAAGCTTTCCGCCCACGGACAT
CGCACCTGCCACGTGGAAATCGTCAGCAAGGTGCAAGGTATCTGCCAGCC
GATGCCCATTGGCAGCGCTTGCGTCTCGGATGACTACATGGACCTCTACA
CCGATGCCAACTGCTCATCTCAAGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTG
ATCGCCAGCGGCATCAGCACCTTGTCGCTTGCGTATATATTTGCCCATGT
GAAACGGGGCGAGAGTGTCATATTGCCACGTTAATCAAACTGTGAACTCA
CCCAGGATGCTGAGACGAAAAACATATCTCATAACCTTTAGAAATAGCAG
CTTCACGTACACGCCCAATCTTGCAATATATGTGTAGAACTGCGAATCGT
CTTGTATTCACTCCGAACGATTAAAGCGTTCAGTT
UFO05544.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14075-RA | 674 | CG14075-RA | 54..518 | 9..473 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18985014..18985478 | 9..473 | 2325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:48:36 has no hits.
UFO05544.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:26:19 Download gff for
UFO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 1..468 | 9..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:04 Download gff for
UFO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 47..518 | 1..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:58 Download gff for
UFO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 47..518 | 1..473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:58 Download gff for
UFO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18985007..18985478 | 1..473 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:04 Download gff for
UFO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18978107..18978578 | 1..473 | 99 | == | Plus |
