UFO05545.5prime Sequence
1047 bp (917 high quality bases) assembled on 2009-07-15
> UFO05545.5prime
CAGTCGACATGTTACATCTACCGAAAATTGTCGACTTGTTGAAGGAGCTG
CAAGAGCAGGAGAAAGAAATTCAAGAGATCATTCTCGAGGAGAGCTTCGC
CAGTCCAGAACAGCGACTAGCCCAACTGGAATCGGTCACATCACGGATGC
ATCTATACCATTCAAGGCGCGGGAATATTCTAATGAGTTTGCAGCAAGAG
CTAGGCAAATATGAGTACTTCACTCTGCTGGTGAGGCACATTGCCCAGAC
GCACAGCTATTTGAAATCGCTCAACAAGGCACTGGACTTCCTGTACAAAG
TCAACATCTGCTCCATCTGCGATTTGAAATGTGAGCCGCATGGCAGGCAT
TCCATGGTGTCCCTGCGTTGTGGCCACCTCTTTGGGCGCCACTGCATCAA
CAACGTCCTGCGGGAGAGCTCTCGGTGCCCCACTTGCTCGCGAAGAGCCC
GTCATCACGAAGTCCGCAGGATCTACGGCTTAAAGTTTTATCCTCTTGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGACCTGATCGCAGCGCATCAGCACTTGTCGCTT
GCGTATATATTTGCCATGTGAAACGGGGCGAGAGTTGTCCATATGCCACG
TTTAATCAAAACTGTGAACTCACCAGGATGCTGAAACGAAAACATATTCT
CATAACTTTAGGAATAGCAGTTCACGTACACGCCCATCTGCGAATTATTG
TGAACTGCGAATCGTCTGCTTACTCAGCAAGAACGTTCAGTTGCCAT
UFO05545.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-RA | 607 | CG14983-RA | 14..502 | 9..497 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3948804..3949292 | 497..9 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:32:07 has no hits.
UFO05545.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:26:23 Download gff for
UFO05545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 7..508 | 1..504 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:10 Download gff for
UFO05545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 7..508 | 1..504 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:36 Download gff for
UFO05545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 7..508 | 1..504 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:36 Download gff for
UFO05545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3948804..3949299 | 1..497 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:10 Download gff for
UFO05545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3948804..3949299 | 1..497 | 99 | | Minus |
