UFO05555.5prime Sequence
1107 bp (989 high quality bases) assembled on 2009-07-15
> UFO05555.5prime
CAGTCGACATGTCGCCGCCACATCACGAAAATCGCCTGTTTGGAATCCAC
CTTGGCCTGAATTTGGGTGGAGGTGGACATCATCACCACCACCATCATCC
ACCGCCTCCGGTGCACCACTATCACCCACCGCCTCCGGTGCACCACCATC
ACCACCACGGACCTCCAATGCACCACCACGGACCCCCGCCGCACCACCAC
CACCACTACGGACCTCCGCCACCGCCGCCCCACTACGATCATCATCATCA
TCACCACGGCAGCCACTTTGACCATCATCATGGTCCTCACCATGGACATC
ATCATCATCACTGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCC
TTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAAT
ATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATG
AAAACGTTTCAGTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTAT
CCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAATTCCGGAAGGA
GCATTCATCAGGCGGGCAAGATGGTGAATTAAGGCGGATAACCTTTGGCT
TAATTTTTTCTTTACGGTCTTAAAAGGCGTATAATCCACCTGAACGGGTG
GTTATAG
UFO05555.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13482-RA | 540 | CG13482-RA | 92..397 | 9..314 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14329437..14329742 | 9..314 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:15 has no hits.
UFO05555.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:26:37 Download gff for
UFO05555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13482-RA | 1..309 | 9..315 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:08 Download gff for
UFO05555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13482-RA | 84..397 | 1..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:15 Download gff for
UFO05555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13482-RA | 84..397 | 1..314 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:15 Download gff for
UFO05555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14329429..14329742 | 1..314 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:08 Download gff for
UFO05555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14322529..14322842 | 1..314 | 99 | == | Plus |
