UFO05562.5prime Sequence
1064 bp (897 high quality bases) assembled on 2009-07-15
> UFO05562.5prime
CAGTCGACATGGGCGATGGACACAAAATCGAGGACATCATCTGGACAATC
AAGAACGGCGTGTACGACGAGGTGGAGCGAATTTTCCTAGCCGGATCGCT
TAATGTGAACGATCAGATGGGCGTCCGGTTCCCCTTGCACTACGCCGCCG
ACTTTGGCCAGCTGAAGCTGCTGGAGTTCTTTGTGCGGATCGGCGCGGAG
GTGGACAGGAAGGACAAGTACGGCATCACACCGCTCCTGGCGGCCATATG
GGAGGGGCATACACGCTGCGTCGAGTTCCTGCTCCGGATGGGAGCCAGCC
GCACGGAGCGCACGCCCGAGGGGCAGAGCTACGCGGAGGCCGCCGAGCAG
GAGGACATTAGACGGCTCCTGGCGCGGGACGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATAT
TTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTT
TAAATCAAACTGGTGAAACCTCACCCAGGGATTGGCTGAGACGAAAAACA
TATTTCCTCAATAATCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACA
CGCCACATCTTGCGAATATATTGTGTAGAACTGCCGGAAATCGTCGTGTA
TTCACTCCAGGCGATGAAACGTTTCAGTTGCTCATGAACGGGGTAACAAG
GGTGAACACTATCCATATCACAGCTCACCGTCTTCATTGCCAACGAATCC
GATGAACATCCACA
UFO05562.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7423-RA | 682 | CG7423-RA | 112..483 | 9..380 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19082808..19083179 | 380..9 | 1860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:47:40 has no hits.
UFO05562.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:46 Download gff for
UFO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7423-RA | 1..375 | 9..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:33 Download gff for
UFO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7423-RA | 16..396 | 1..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:16 Download gff for
UFO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7423-RA | 103..483 | 1..380 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:16 Download gff for
UFO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19082808..19083183 | 1..380 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:33 Download gff for
UFO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18976841..18977216 | 1..380 | 98 | | Minus |
