UFO05570.5prime Sequence
1096 bp (990 high quality bases) assembled on 2009-07-15
> UFO05570.5prime
CAGTCGACATGGAGCACCATCAGATCTATCGCCACAAAAAGTTCGACATG
GGTCGAAAGATTGAGAAATGCGATTTGCAGCTGAAGGAAGAGCTAATCTC
CCGGAGCGGCACACCCTGCACCAGTCGGAGTCCTTTCGATGCGGCAAATC
AGTCCGTCAGCTTGGGTTTCAGTGATCAGGATGCTGACTTTCCTCCACTG
CCAAAGCGTCGTCGTTTGGGATCCTCATCCTCAAGCGTTTCCTACCAATC
CGCCAGCCCCATCATAACCGAGGCCATCCAAGACATCTTCAAGTACCACG
TCAATATGGTGCGAAAATTCCCGAAGAAGGAGCGTTCACCGAAGGATCAG
GAGCGCCGCAACAAGAACACAATTGCCTGCAGGATGAGTCGACGGAAGAA
GAAGTTCGATGACCTGCAGATCGAACAGCAGTACAAGGAGTGCTCCGATG
AGCACCTCAAGATCGCCGAACAGAGTCTGCGTGCCAGGGTCTATTTGAAT
CATCTGAAGCAGCTGGTCAAGCAGGAAGACCACCCGCTAGTATCCTCAAG
GAGAGTTCCGGAGGAGAATACCAAGAGTAACTTTAGCATCGACTACCTGA
TAGGTGGTATTAAACAGGAGCATGCTGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGTATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAATTACGCCCGCCCTGCACTCATCGCAGTACTGTTGTAATTCA
TTAGCATTCTGCCGACATGGAGCCATCACAAACGGCATGATGACCTGAAT
CGCCAGCGGCATCAGCACTTGTCGCTTGCGTATAATATTTGCCCATGTGA
AACCGGGGGCGAGAGTGTCCATATTGGCCACGTTAAATTCAACTGGGTGA
ACTCACCAGGATTGGCTGAAACGAAAACCAATTTCCATAATCCTTA
UFO05570.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..683 | 9..626 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233978..13234595 | 626..9 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:15:39 has no hits.
UFO05570.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:42 Download gff for
UFO05570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 33..656 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:47 Download gff for
UFO05570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:54 Download gff for
UFO05570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 1..626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:54 Download gff for
UFO05570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233978..13234601 | 1..626 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:47 Download gff for
UFO05570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233978..13234601 | 1..626 | 99 | | Minus |
