UFO05571.5prime Sequence
1012 bp (915 high quality bases) assembled on 2009-07-15
> UFO05571.5prime
CAGTCGACATGCCTGGTGAGGCAAATAACACGCCTCAATCCGGACGGAGA
CCCCGACTCGGATTGAGTAGGCGTGGTTGCCAGTCAACGCCCTTAATAAG
ACTTCAGAGAGACGATTCCGCTGCAAATACACCAAAATGTAGTGAACAGG
AGACTCCGCGGGCACCGCCTTTATCGCTGAGCTCTCGCAGGATAGGATTG
TCCAAAAGCAGGACAGGCTTGTCCAAGAAGAAGCTAGAGTTTGCTGCGGC
CCACGGAATTAAGGACGAGGAACGGGAAATAGTGAAGAAAACAGCAAAAA
AGGATAAAAAGGAAAGGAATGATGCTCAAGAGGCTCTTGATGCGCCAGAG
GAGATACAGGAGCACGGCAACCAGAAGAACCAGCTTGAAAACAGTCCACA
GAGCAGTAAAATCGTTGAGCTACAGGGCGATATAGAAATCTGGCGGCAGG
GATTCAAAGCTTCTGTGGGTGACCTACTAACTATGGCGGAGCCAGGACTC
TCAAGAAGCGATCTCCTTACTCGGCTGGGCATTCCCCACGAGATGCTACG
CTATCTGGAGGAGGAGTGTCCAGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTATTCATT
AGCATTCTGCGACATGCAGCATCACAAACGGCATGATGACTGATCGCAGC
GCATCAGCACTGTCGCTGCGTATATATTTGCCCATGTGAAACGGGGCGAG
AGTGTCATATGCCACGTTATCAACTGTCACTCACCAGAATGGCTGAACGA
AACTATTTCCAT
UFO05571.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15536-RA | 664 | CG15536-RA | 26..589 | 9..572 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30424574..30425137 | 572..9 | 2820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:17:29 has no hits.
UFO05571.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:43 Download gff for
UFO05571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15536-RA | 1..567 | 9..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:46 Download gff for
UFO05571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15536-RA | 26..594 | 9..580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:03 Download gff for
UFO05571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15536-RA | 26..594 | 9..580 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:03 Download gff for
UFO05571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30424569..30425137 | 9..580 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:46 Download gff for
UFO05571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26250291..26250859 | 9..580 | 99 | | Minus |
