UFO05579.5prime Sequence
1110 bp (974 high quality bases) assembled on 2009-07-15
> UFO05579.5prime
CAGTCGACATGCCCATCCACTGGGACTGGGATTGGGAGCATGATCACGAG
CATGGTCACCATCACTGGCAACCGCCGCGTCGCCACTGGTCCACCGGGGA
GTCCAAGTGCCGGCAGAGGCACTACTATCTCTCCCACGACCTGGACGTAT
GTGCGCGGGACTTTCACTTGCGGATGGACGACAGTGCCTGGTGCCATGGA
TCCTGTCTGGTTGGGCGAGTGGTCATAGAGACCGGCACCGAACCGGACTC
CCTGGGTCGGGGCACCTTCAAGGTGGTGCTGGACGTGCACCACTTTCAGA
TCTCTGAGCTCACGGTGAAGGCCAAAAACAGCGACACCGTGTGCGTGGAG
GGCAAGCAGGCGGATGACCGGGCGGAGAAGGGTCAGTTGTGCATCACTCG
CGAGTTTACGCGATCCTACAAGCTACCACGGCACTACGATGCCACACAGG
CACGGGCCACCTTCTCTGCGGACGGAATACTGATGATTACGGTGCCAGCA
CCACCGAAACTGGACGACGTGGAGCGCGAGATCGAGATTGAGCCCACGGG
CAATTACTTTGGCAGCGTGTCCGATCCCACGGCGCCCAAGGCTATCGAGC
AGGCGGATGTGGACGGCGATGGTGGAGAGGCTAATCCTGCTGGCACGGCG
ATGGACAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGATCTATCAACAGGAGTCCAGCGAGCTCGATATCAAATTACGCCCC
GCCTGCACTCATCGCAGTACTGTTGTATTCATTAGCATTCTGCGACATGA
GCATCACAAACGGCATGATGACTGATCGCAGCGGCATCAGCACCTTGTTG
CTTGGCGTATAATATTTGGCCCATGGGTGAACGGGGGCGAAGAGTGTTCT
TATTGCCACGTTTAAATCAAACCGGGTGACTCACCAGGGATTGGCGTGGA
ACCGAAACAA
UFO05579.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13133-RA | 1182 | CG13133-RA | 154..805 | 8..659 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10091585..10092236 | 659..8 | 3260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:39 has no hits.
UFO05579.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:29:08 Download gff for
UFO05579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13133-RA | 180..841 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:25 Download gff for
UFO05579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13133-RA | 150..811 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:50 Download gff for
UFO05579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13133-RA | 150..811 | 1..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:50 Download gff for
UFO05579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10091579..10092240 | 1..665 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:25 Download gff for
UFO05579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10091579..10092240 | 1..665 | 99 | | Minus |
