UFO05586.5prime Sequence
1003 bp (849 high quality bases) assembled on 2009-07-15
> UFO05586.5prime
CAGTCGACATGCATATCGTGAGTGGCAAGAATCTGAGCCGCGAAGAGTTA
GAGGAAGTTAACAAATGGATGCAACAAAATAGTATTAGCACTCAAAGATT
GCGTCGCGAGTTTTCCGATGTTTTGCCGCTGGCCGAAATATTCAAACGCG
ATTATCCGCGCTTGGTGGATCTCTTCAATTATCCGAAGAAGAGTAGTGTT
CAGCTGAAGTTGGCCAATTGGGAGACATTCAACTTTAAAGTGTTATCCAA
GTTAAATATGACGTTGACTAAAGATTTTATGGAGCAAATGGCGAATGGTG
TTAGTGGTGCCGCCGAAGTCATGTTGCATGAAGTGATACGATTGGAGAAA
CGACAACGCCTTGCAGAACAACGAAATGCGGCATTGCGGCAGGAACAACT
TTGGGAGGAAAATGATGAGATAAAAACTGTTGTGGTTAACAAACAGATCG
GCGATGGCATAGTTCAGGTGCCGCAGAAAATGATCCTATATTCGCTGTAC
GAGAAAGTGGAACGTGATAGTCATGCAAAAGATGTTATTATCGATGCCTA
TCAACAGCGATTGACCCACATGGAGAGTATTATTAAATTGAAAACGGAAC
GGATCGACGAACTTCTAATGCAGATGGGTAAACAACCTCAAAAGAGAGCT
ACTAGCAACGCAACCAATTGTTTCTTTGCTTACGATGGGAAGAACTCCCT
AATTCAGAAGCATATAAGTCCTACGCAAGCATCATCGCCTACCCATCTGG
ATGCGGACGGCTTTACATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGGTGGTCATAATCATAATCATATCATATCATATCCACA
CTAGGCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCCCAACCAATAA
AAAACCGCCCGGCGCACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGA
GTCATACTGATCTTCACAGGATCAGCGAGCTCGATATCCAATACGCCCGC
CTT
UFO05586.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-RA | 997 | CG12395-RA | 125..881 | 9..765 | 3770 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16062018..16062774 | 765..9 | 3770 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:04:19 has no hits.
UFO05586.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:29:38 Download gff for
UFO05586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 57..824 | 2..773 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:59 Download gff for
UFO05586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 79..846 | 2..773 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:52 Download gff for
UFO05586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 122..889 | 2..773 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:52 Download gff for
UFO05586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16062010..16062777 | 2..773 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:59 Download gff for
UFO05586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15956043..15956810 | 2..773 | 98 | | Minus |
