UFO05592.5prime Sequence
1073 bp (958 high quality bases) assembled on 2009-07-15
> UFO05592.5prime
CAGTCGACATGGCTCTTGTGAAGACGTACACCATCGACAATAACTCCATT
CCATGGATTCTGTGGCTACCGCCATTAACGGAAGTGGATAGGAAATCGCC
GGGTGGGAGGTTCACATTTGATGGGCCAAAGGTGGTGGCGTTTCACTTTG
TTAAGAACCGGCACGGAGACACGTTGGACAAGTGGATAAGTCTGCTCGAT
GAGTTGGCACAGGAGTACGCCGGTCGTATATTGTTCGGATTGCGTGACAT
CTCCAACATCGGGGAGTTCAATCCGAACCTAAATCCCGACGACTTTGGCA
GCTACCGGAAGGGATTGCCACCGCGAATCTATGGCAAGGACTGTGAGGGC
CGAGTGTACGATATGCACAAGCTGGTCAACGCCAAATACCTGAGGGAGTT
TTGCGACCAGTTGCTGGCGGATCAACTCTTCCGTGCCGTAGTCCTGGGCG
CCACTGCCTCACTGGACTCCAAGCCAATGAATTACTTTGAGTTGCGGGAA
GAGAGCAGCAGCGATATGCTGGTGATGCTATATGATCCTGCCTGCTACTA
CTGGCCCATTCAGAAGAGGATGCTGCGCAAGCTGATCCGCCTGCTGGCCA
GCGAGGATCTGCCCATTGTGATCGTAGACAAGGCGAATAACTACCTGGGC
GTGGGCTTCACCCGTTGGCTGCAGATGGTCAACTGTCACGGCTCCACCAT
CTTCACATCGCCACGTCGCGATGGCTGGGATATTAAGTTGTCGGTGCGAA
TGGAGAGCACACGTGGCTACCTGCGATACATCGCCCGAACAGGCAGCCGG
AGCTAATTGACTTCGATGCCGATGGGGAGCCCAGAGCACTGGAGCAGGCC
GTGAGTATATACAGTATTTGTTTGCAGCTTTCTAGACCATTCGTTTGGCC
GCGCGGGCCCAGGTAGTGGTCATATCATAATCATATCATATCATATCACA
CTAGCCTAGGAGATCTGTCATGACTAGTGCTGGATCTCACAATAAAACGC
CCCGGCGGCCACCGGAGCGTTCTGAACAATCCGAATGGAGTTCTGAGTCA
TACTGATCTATCACACAGGATCC
UFO05592.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-RA | 1116 | CG14695-RA | 47..913 | 9..873 | 4285 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10878407..10879273 | 873..9 | 4235 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:53 has no hits.
UFO05592.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:29:49 Download gff for
UFO05592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 1..870 | 9..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:08 Download gff for
UFO05592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 40..916 | 2..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:45 Download gff for
UFO05592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 40..916 | 2..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:45 Download gff for
UFO05592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10878407..10879278 | 2..873 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:08 Download gff for
UFO05592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6704129..6705000 | 2..873 | 99 | | Minus |
