Clone UFO05601 Report

Search the DGRC for UFO05601

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:56
Well:1
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05601.5prime Sequence

1001 bp (852 high quality bases) assembled on 2009-07-15

> UFO05601.5prime
CAGTCGACATGACAGAGAATCAGCTGTATCCCATGTCATCGGAGTTCTTT
GACACCGGCTCGAACAGCAGCAGCAACACACTTAAATACGATCTGTATTC
CCTGGGCTCCACCGTTGTGGGGGCGGCGCTGCCCACGTTGACGATCAACA
CGGGCTACGGCAGCAGCAGCAGCAACAATAACAACACTAATAACAACAAT
AACAACAGCAGTAGTCACAGCAGCAGCAGCAACTGCTCCACCAGCACCAC
AAATACCTGTAATGTAATGCTAAGTACAACGGCCATAACAATACCACGCA
GCAGCAACCACAACCAGATCCATCATCATCCGTATCAGCAGTCCGATTTG
CAGACACCGCGCCATCATCCCAGTCCTCTACACACGTTGCCCAGCATGAC
CCATCAGCAAAATCAGCTTCAGCAGCAGCAGCAGCAGCAACACCACAACC
AACAGCAGCAGCTGCAGCAATCGCATTTGGCACTGGGAGAGCTTTCAGAC
TTTGGACTAGATGCACTGGATGCCGCTTCGCTATCGCCCACTCTGCTGCA
GGATGTGAGCCTGAGTGCTGTTTCTCCTCTAAGCACCACACTCTACAATG
GCAACACCAGTGGAGCACGCAGCAGCAACGGAATAGGATCCGGCAGTGGT
GGCTACTTCACGCCCGACATGTCGCACAGCCTCAGCCTGAATGTGGTCAG
TGAGCAGGTTCTGCTGCATGAAGCCACAACCCCGAATGAGTTGCTCTACG
AGATGACACCCAACTCGAATGCCATGTGGAGTGATATCAGCAGTGCCATT
ATCCATACCAAACACGAGCATTCAGTCTGGACGATGACTATATCTTTCCC
AAACGATAAGCGAAAATACAGCAGCCGATTTGTCTGACCTTAATGGCGGC
GATTTTTCTGGATGTGATCGAAATATAGAGGATTTCTTGGCCGCAGAACG
CAATCACTCATGTGTCAATTTCCTACTGTCGCCGCAAGCTCAAGATCTGG
A

UFO05601.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG13624-RG 3698 CG13624-RG 776..1763 9..994 4650 98.5 Plus
CG13624-RF 3805 CG13624-RF 433..1420 9..994 4650 98.5 Plus
CG13624-RE 3680 CG13624-RE 308..1295 9..994 4650 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24561855..24562842 994..9 4455 98.1 Minus
Blast to na_te.dros performed 2014-11-28 20:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2335..2671 144..475 377 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..7179 148..617 343 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..7086 161..469 334 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2641 161..469 330 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..7004 180..462 255 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2543 182..446 236 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..6952 201..437 234 58.1 Plus
roo 9092 roo DM_ROO 9092bp 1049..1160 210..320 152 63.2 Plus

UFO05601.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:29:53 Download gff for UFO05601.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13624-RA 429..1422 9..1000 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:48 Download gff for UFO05601.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13624-RC 1306..2299 9..1000 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:57 Download gff for UFO05601.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13624-RE 308..1301 9..1000 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:57 Download gff for UFO05601.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24561849..24562842 9..1000 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:48 Download gff for UFO05601.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20387571..20388564 9..1000 98   Minus