UFO05617.5prime Sequence
1051 bp (895 high quality bases) assembled on 2009-07-15
> UFO05617.5prime
CAGTCGACATGCAAAAAGTGCTGGGACGCATCCAGGCGCAGGTCCTCCGC
TCCCGGGCGACGAATGCATTAGCCAATGTGGTTAGACACGAGGCCACCTC
CTCCAGGACAGCGGCTAAACCAGCCGCCACATCCAAAGAATTCCGGGAGA
GACAGGTGCGATTCAACATAAAGAACGAACAGACCGAGGGTAGACCACTT
TACCTGGATGCCCAGGCCACCACTCCAATGGACCCACGTGTATTGGACGC
TATGCTCCCCTATCTGACCAATTTCTACGGAAATCCCCACTCCCGTACCC
ACGCCTACGGTTGGGAAACAGAGTCCGCTGTAGAAAAGGCCCGCGAGCAG
GTGGCCACCCTGATTGGCGCCGATCCCAAGGAGATCATCTTCACATCCGG
CGCCACCGAGTCGAATAATATCGCAGTAAAGGGTGTTGCCCGTTTCTACG
GCACTAAGAAGCGACACGTGATCACCACCCAGACGGAGCACAAGTGCGTG
CTGGACTCTTGTCGTGCTTTAGAGAACGAGGGCTTTAAAGTCACGTACCT
GCCAGTGCTGGCCAACGGACTCATCGACCTCCAGCAACTGGAGGAAACCA
TCACATCGGAGACCTCGCTGGTGTCCATTATGACGGTGAATAACGAAATC
GGCGTACGGCAACCCGTCGATGAGATTGGCAAACTGTGCCGGTCTCGCCG
AGTATTCTTTCACACGGATGCCGCTCAGCGGTGGGAAAGGTCCCGCTGGA
CGTTAACGCCATGAACATTGACCTGATGTCTATATCCGGCCACAAAATCT
ACGGCCCAAAGGGTGTAGCGCCCTGTATGTCCGACGAGCCGAGGGTTCGC
CTCGAGCCCATCCAAAGTGCGGCGCCAGGAGCGTGCCTAAGAGCGACGGT
TCAGCCCCGCTCGCCGTGGGATGGGAGCTGCTGCGACTTTCTTGCTGAAT
GACTACGACAGGAATGGTGACTTCATCATCGCTGCTGACGAATCCAGTGC
TGCGCATGTCATCAGATGTATGCAAGCCATACATGTGCCTGAATGGCTTG
C
UFO05617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12264-RA | 1533 | CG12264-RA | 72..1045 | 9..964 | 4435 | 98 | Plus |
| Qtzl-RC | 926 | CG31864-RC | 75..351 | 9..285 | 1385 | 100 | Plus |
| Qtzl-RA | 672 | CG31864-RA | 75..351 | 9..285 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11999911..12000721 | 137..935 | 3525 | 98.5 | Plus |
| 2L | 23513712 | 2L | 11996000..11996148 | 137..285 | 745 | 100 | Plus |
| 2L | 23513712 | 2L | 11995814..11995943 | 9..138 | 650 | 100 | Plus |
| 2L | 23513712 | 2L | 11999725..11999854 | 9..138 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:46 has no hits.
UFO05617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:07 Download gff for
UFO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12264-RA | 65..1042 | 1..961 | 97 | -> | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:28 Download gff for
UFO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12264-RA | 65..1042 | 1..961 | 97 | -> | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:15 Download gff for
UFO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12264-RA | 65..1042 | 1..961 | 97 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:15 Download gff for
UFO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11999718..11999854 | 1..138 | 97 | -> | Plus |
| 2L | 11999913..12000753 | 139..961 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:28 Download gff for
UFO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11999718..11999854 | 1..138 | 97 | -> | Plus |
| arm_2L | 11999913..12000753 | 139..961 | 97 | -> | Plus |
