UFO05619.5prime Sequence
1102 bp (994 high quality bases) assembled on 2009-07-15
> UFO05619.5prime
CAGTCGACATGTCGATGTCTGCCACGTGCTACAAGTGCAACCGGCCGGGC
CACTTTGCCCGGGACTGCAGTCTCGGCGGCGGCGGAGGTCCGGGCGGCGT
TGGAGGAGGCGGTGGTGGCGGCGGCGGCGGTATGCGCGGCAACGATGGCG
GCGGCATGCGTCGCAACCGCGAGAAGTGCTACAAATGCAACCAATTTGGG
CACTTCGCACGTGCCTGCCCCGAGGAGGCCGAGCGCTGCTACCGCTGCAA
CGGCATCGGGCACATCTCGAAGGACTGCACCCAGGCGGACAACCCGACCT
GCTACCGTTGCAACAAGACCGGACACTGGGTGCGCAACTGCCCAGAGGCC
GTCAACGAACGTGGACCGACCAATGTGTCGTGCTACAAGTGCAACCGCAC
CGGACACATCTCCAAGAACTGCCCGGAGACCTCGAAGACTTGCTACGGCT
GCGGCAAGAGCGGACATCTGAGGCGCGAGTGCGACGAGAAGGGCGGACGG
AACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGCCACGTTTAAATCAAACTGTGAAACTCCACCCAGG
GATTGCTGAGACGAAAAACATATCTCATAAACCCTTAGGAAATAGCAGTT
TCACGTAACACGCCACATCTGCGAATATATGTGTAGAACTGCGAATCGTC
TGTATTCACTCCGAGCGATGAAACGTTCAGTTGCTCCATGGAAACGGTAC
AG
UFO05619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3800-RB | 2068 | CG3800-RB | 213..707 | 9..503 | 2460 | 99.8 | Plus |
| CG3800-RA | 2509 | CG3800-RA | 566..1060 | 9..503 | 2460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22936018..22936512 | 503..9 | 2460 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:10:21 has no hits.
UFO05619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:10 Download gff for
UFO05619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3800-RA | 412..918 | 2..509 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:41 Download gff for
UFO05619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3800-RA | 559..1065 | 2..509 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:06 Download gff for
UFO05619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3800-RA | 559..1065 | 2..509 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:06 Download gff for
UFO05619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22936018..22936519 | 2..503 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:41 Download gff for
UFO05619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18823541..18824042 | 2..503 | 99 | | Minus |
