UFO05636.5prime Sequence
1047 bp (924 high quality bases) assembled on 2009-07-15
> UFO05636.5prime
CAGTCGACATGTCTGTCCCTGTACGCTACTCCTCTGCTGCCGCCGAATAC
GCCGCCGAAGTTGATTGTGAGTTGGAGAGCACTCTGCAACAGCAGCAACA
GTTGCACTTGCAACAGCAATACGAGCAATACCAGCACTACCAGTACCAAC
GGGAGCAGGATATCGCCTACTATTGCCAGTTGCAGGCGGCGCGGCAGCAG
GAGCAGTTGATGCAGCAGAGGACATCGATGTCGTCGTCGGTTATGCCAGG
CCTAGCCTTGCCCCAGGATCACCAGGACCACCCAGCCGCCCTTTTGAACG
GACCCCACAACAACAACATCGGACTCGCCATGGACGCCCACAGCATCAAC
GCCATTCTGGTCGACGACGAGCAGCCCTCGACTTCGGCCCAGGCTGCCGC
CGCTGCTGCCGCATCCGCGGGTGGATCTGCTGGTGCGGGATCGGGATCGG
GATTGGGTGGTGCTATCGGTGGGGGCAAGCTGGCCAACGGCATTAACCGC
AATGCAGAGATGCCAACTGATTGGATGAGGATTGCGGACGAGGGCCGGTA
TGGGACACCGGGTGCTGCTGGCTTGGAATATCAGAAGTACGAACAACAAC
AACAACTGGAGGATCTGGCGGAGTCCGAGGCAGGAGCCGTCGGTGGAGCC
AGCAACAACAACGGCGAATCGTCGTCGTCCTTGAAAAAGCTAGAGGATCA
GCTGCACGCCCTCACCTCGGACGAGTTGTACGAAACCCTCAAGGAGTACG
ACGTCCTGCAGGACAAGTTCCACACGGTGCTGCTGTTGCCCAAGGAATCA
AGGCGTGAGGTTACTGCCGGAGGACGAGATGGATCCGCCTACGTGCTGCG
CTGCCTGAGATGTGGTACGAGCTGCCCTCCGACGTCCTGTCTCGGCATGA
GCTGGTGACCGCTTCCTGGATCGCATACGTCAAGCGAAGCACATGGCTGC
ATGAGCGTGCTCGTTCCACTTGCATCAAGCAGCTGACTGAATCCATTCCG
CCGAGATCTGGTACAATATCTCATTGGGTGTTACCGCTGTGGATCTG
UFO05636.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycG-RF | 4450 | CG11525-RF | 119..1177 | 9..1047 | 4720 | 97.5 | Plus |
| CycG-RC | 2687 | CG11525-RC | 517..1575 | 9..1047 | 4720 | 97.5 | Plus |
| CycG-RB | 3132 | CG11525-RB | 962..2020 | 9..1047 | 4720 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31601416..31602210 | 803..9 | 3975 | 100 | Minus |
| 3R | 32079331 | 3R | 31601157..31601352 | 985..803 | 420 | 92.9 | Minus |
Blast to na_te.dros performed 2014-11-28 23:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..7006 | 87..284 | 215 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6861 | 87..217 | 188 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6910 | 87..218 | 173 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2496 | 76..226 | 170 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6840 | 88..217 | 161 | 62.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1146 | 87..160 | 158 | 73 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6889 | 87..218 | 153 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2380 | 86..160 | 150 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6867 | 87..160 | 147 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2392 | 78..157 | 145 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1081..1162 | 76..158 | 142 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1536..1585 | 87..136 | 133 | 74 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6903 | 88..163 | 130 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2853 | 84..150 | 128 | 65.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..6915 | 87..160 | 127 | 63.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2870 | 87..152 | 114 | 63.6 | Plus |
UFO05636.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:15 Download gff for
UFO05636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 960..2018 | 1..1039 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:40 Download gff for
UFO05636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 960..2018 | 1..1039 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:06 Download gff for
UFO05636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycG-RB | 954..2012 | 1..1039 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:06 Download gff for
UFO05636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31601416..31602214 | 1..803 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:40 Download gff for
UFO05636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27427138..27427936 | 1..803 | 99 | | Minus |
