UFO05637.5prime Sequence
1054 bp (913 high quality bases) assembled on 2009-07-15
> UFO05637.5prime
CAGTCGACATGGTCGAGCGCATCGAGGATCTTAACCTGCCGAATGCCGTG
ATTGGCCGGCTCATCAAGGAAGCACTGCCGGAGTCAGCTAGTGTCAGCAA
GGAAGCGCGAGCAGCGATCGCCCGAGCGGCATCTGTGTTTGCCATCTTCG
TGACATCCTCGTCGACGGCGTTGGCCCACAAGCAGAACCACAAGACCATC
ACGGCCAAGGATATTCTACAGACCCTCACCGAGCTAGACTTCGAAAGCTT
CGTGCCCTCTCTGACGCAGGATCTCGAGGTCTATCGTAAAGTGGTCAAGG
AGAAAAAGGAGAGCAAGGCCAGCAAGAAGGATTCCAACACTGCCGAAAAT
GCCAACGCCAGTGCCACCGCAACAGCAGAGGAAGCCCCCGAGGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCT
TGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCAT
ATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTG
AGACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCAGTTTTCA
CGTACACGCCACATCTGCGAATATATGTGTAGAACTGCGAAATCGTCTGT
ATCACTCAGAGCGATGAAACGTTTCAGTTGCTCATGAAACGGTGTACAGT
GAACACTATCCCATATCACAGCTCACGGTCTTCATGCATACGAATCCGAT
GACA
UFO05637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-14-RB | 592 | CG13399-RB | 101..484 | 9..392 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8437505..8437888 | 9..392 | 1920 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:13:16 has no hits.
UFO05637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:25 Download gff for
UFO05637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-14-RA | 88..478 | 1..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:59:36 Download gff for
UFO05637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus201-RB | 94..484 | 1..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:37 Download gff for
UFO05637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-14-RB | 94..484 | 1..392 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:37 Download gff for
UFO05637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8437498..8437888 | 1..392 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:59:36 Download gff for
UFO05637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8437498..8437888 | 1..392 | 99 | == | Plus |
