UFO05639.5prime Sequence
1089 bp (994 high quality bases) assembled on 2009-07-15
> UFO05639.5prime
CAGTCGACATGGCCGCCTTAAGCTTCAGCCCATCACCTCCTCCAAAAGAA
AACCCCAAGGAAAACCCCAATCCAGGAATAAAAACCACGTTGAAACCTTT
TGGAAAGATTACCGTTCACAATGTTTTAAGTGAGAGTGGCGCCAACGCCT
TGCAACAGCATATAGCCAATCAGAACACCATTATTCGAAAGATCCGGGAC
TTTGGCATGCTGGGCGCTGTTCAAAGTGCCGCAGCCAGCACAACTAACAC
CACACCCATATCCAGTCAACGGAAGAGGCCCCTGGGAGAATCCCAAAAGC
AGAACCGGCACAACCAGCAGAATCAACAGCTTAGTAAAACATCAGTGCCT
GCTAAAAAATGCAAGACCAACAAGAAGTTGGCGGTTGAAAGGCCCCCAAA
AGCAGGAACTATAAGCCACCCTCATAAAAGCCAAAGCGATCAGAGTTTTG
GGACTCCTGGAAGAAAGGGTTTGCCTTTGCCACAAGCCGTTGCCCGTAGA
AACGCTAGGGAAAGAAATCGCGTGAAGCAGGTTAACAATGGATTTGCTTT
ACTCCGGGAGAAGATCCCAGAAGAAGTATCTGAGGCTTTTGAGGCCCAGG
GGGCGGGTAGAGGAGCAAGCAAGAAGCTATCCAAAGTGGAGACCCTCCGC
ATGGCCGTAGAGTACATAAGAAGTTTGGAAAAACTGCTGGGATTTGATTT
TCCACCTCTCAACAGTCAGGGGAATAGTTCTGGTTCCGGCGATGATAGCT
TTATGTTTATTAAGGACGAATTCGATTGTCTGGATGAACATTTCGACGAC
TCGCTGAGCAACTACGAAATGGATGAGCAACAGACTGTCCAACAAACTTT
ATCCGAGGATATGCTAAACCCTCCGCAAGCCAGTGATCTCCTGCCTAGTT
TGACTACATTAAATGGGTTGCATACATCAGATACCAGGACCACACTACAC
TGCTGACGACTGACTTATTGGGCGATTTGAGTCACGAGCAAACTTGAAGA
AACAGCTGCTCGTCAGTTATCCGCGATCGCCCGTGCCCAAAGGTGTAGAG
TCCTGCTCCTTCTCAGTTTCACTGTCGCCTCGCACTGAT
UFO05639.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-RA | 2430 | CG3258-RA | 210..1306 | 9..1088 | 4940 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 460956..461966 | 9..1010 | 4705 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:00:37 has no hits.
UFO05639.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:53 Download gff for
UFO05639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1270 | 9..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:15 Download gff for
UFO05639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1270 | 9..1053 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:15 Download gff for
UFO05639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 460956..462016 | 9..1053 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:53 Download gff for
UFO05639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 354989..356049 | 9..1053 | 98 | | Plus |
