UFO05655.5prime Sequence
1125 bp (981 high quality bases) assembled on 2009-07-15
> UFO05655.5prime
CAGTCGACATGCCCGAAAACTCGGTGGTAGTCCAGTTAATGCAGGCCGTC
GGCGGCGGAATCGCCGGAGCTGCGACGCGGACCATAACCCAGCCGCTGGA
CGTTCTGAAGATCCGATTCCAGATGCAAGTGGAGCCGGTGACAAACCATA
AGGGGTCCAAATACCGTGGAGTCATCCACGCTTTCAAGTCGGTGTACGCC
GAGGAGGGAATGCGCGGTATGTTCCGTGGTCACAACTCCGGCCAGGTTCT
GAGCATTTCGTACGCTCTGGTACAGTTCTGGTCCTACGAACAGCTTCGCT
CCATGGCCCACCAGTTTGACTACTGGAGGGAGCGACCCTTTCTCATGTTT
TTCATCTGCGGCGGCATAGCCGGATGTCTGGGAGCCGTGGCCGCCCAGCC
GTTCGACGTGGTAAGAACACAGATGGTGGCCGCAGACCCCTCCTCGCGCC
GCAGTCAGATGAACACTTTTACCGGACTTCGAAAGGTCTATAAGATGGAG
GGGTGGATGGGACTTTCCCGAGGACTACCCTTCACGCTTGTGCAGGTGTT
TCCGCTGGTAGGGGCAAACTTTCTCTTCTACAAGTACCTCAACGCGGCTG
TCTTGATGGCCAAGCCTCCCGACCAGCGCCAGGAAATCCACGGCGCATTT
CTGTTTCTCAATGGGGCGCTGTCAGGGGTGTTGGCCAAGATGATCGTGTA
CCCGGCGGACCTGCTTAAAAAGCGCATCCAGCTGATGGCCTTCAAACAGG
AACGTAAGACCTTTGGCCGCAACCCCGAGTGCCCTACGATCCTGGGCTGC
ATCACCACCACGTTTCGGGAGGAAGGAATCGGAGCTTCTATAAGGAATGT
TGCCTACTCTACTCAAGGCAGACTGATGAGTGCCGTGTACTTCTCCATCT
ATGACATGTTTAGCGCCACTATATAGCTCCGATGAAAGAAGGCGGAAAAA
ATCGGCAAACTGGGAAAGCATGCAAGCTTTCTAGAACATTCGTTTGGCGC
GCGGCCCAGGTAAGTGGTCCTAATCATAATCTTATCTAATCAAATCCCAC
TAGCCTAAGGAGATCCTGTCATGACTATGGCTGATTCTCACCAATAAACG
CCGGGCGCACGACGTCTGAACAAAT
UFO05655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpc2-RB | 2769 | CG2857-RB | 231..1199 | 9..971 | 4630 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24899550..24900504 | 959..9 | 4485 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:39 has no hits.
UFO05655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:48 Download gff for
UFO05655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2857-RA | 159..1133 | 1..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:49 Download gff for
UFO05655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpc2-RB | 225..1199 | 1..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:56 Download gff for
UFO05655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpc2-RB | 225..1199 | 1..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:56 Download gff for
UFO05655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24899548..24900510 | 1..960 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:49 Download gff for
UFO05655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20787071..20788033 | 1..960 | 98 | | Minus |
