UFO05661.5prime Sequence
1025 bp (875 high quality bases) assembled on 2009-07-15
> UFO05661.5prime
CAGTCGACATGATCCAGGATTCGCCGCAGGAGCGTCGCAGGACGAGTCGC
CGGCGCAGTCAGAAGCATCACCGCTGGAAAAAAACACAGCCTATACGAAA
CACACAGTGCAACAGCAACAGCAACAACAGCAACACAACCAACCAACCAA
CCAACAAGAACGACTTAACGGAGCTAGAAAAGCAGCCGACCACTGGCGAT
CAACGCAGCCCATCCTCAGCCCGCCACTCAACTGCGCCAGCCCTTCGACT
TCGAGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCA
CCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGG
AAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTG
TAGAAACTGCCGGAATCGTCGTGATATTCACTCCAGAGCGATGAAACGTT
TCAGTTTGCTCATGGAAACGGTGTACAGGTGACACTATCCCATATCACAG
CTCACCGTCTTCATGCATACGAATCGATGAACATCATCAGCGGCAGATGT
GAATAAGCGATAACTTGGCTTATTTTCTTACGTCTTAAAAGCGTATTTCA
GCTGACCGACTGTTTAGGTCTGACA
UFO05661.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42784-RI | 5345 | CG42784-RI | 1341..1589 | 9..257 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13484360..13484608 | 9..257 | 1245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:38 has no hits.
UFO05661.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:56 Download gff for
UFO05661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31846-RA | 1334..1588 | 9..263 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:56 Download gff for
UFO05661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1595 | 9..263 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:14 Download gff for
UFO05661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1595 | 9..263 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:14 Download gff for
UFO05661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13484360..13484608 | 9..257 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:56 Download gff for
UFO05661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13484360..13484608 | 9..257 | 100 | == | Plus |
