UFO05670.5prime Sequence
1079 bp (965 high quality bases) assembled on 2009-07-15
> UFO05670.5prime
CAGTCGACATGGATACGGATATTCAAAGATGCTTCCGGAGCAAAACGGTG
TTCCTAACTGGAGCCACCGGCTTTTTGGGTAAAGTCGTTATTGAGAAACT
TTTGCGGACCACAGAGGTGAAACGCATCTATGTGCTAATTAGACCAAAGC
GCGGAGTTGAGATTAAGGATCGGATTATCACCTGGTCAAAAGATGCGGTA
TTTGAACTGCTGCTGAAGTCCAAGCCGGAGGCACTTCAAAGAGTATGTCC
CATCGCTGGGGATTGCCTCGACTTTGATTTGGGAATCAGCGAGAATGATC
GAAGACTTCTGGCCTCCGAGGTGCAGATTGTCATCCATGGAGCTGCCACC
GTGCGATTCAATGAGCCGCTTCACGTGGCCCTGGCCATCAACACAAGGGC
CACCAAGCTGATGATTCAACTGGCCAAGGAAATGAGGCAGCTGGAGGCCT
TCGTTCATGTATCGACCGCCTTCTCCAACTGCGTTATCTACAACATCAAG
GAAAATTTCTACCCCGAGCATCTCAACTGCAGTTCCGATAAGGTGCTTGC
AATGGCAGAGCTGATGAGTGACGAGCTACTGGACAACATGGAGCAAGCGC
TCCTTGGCTCGTTTCCCAACACGTACACGTACACCAAAGCACTGGCGGAG
GATGTGATCCTGAAGGAAGCGGGTGGCTTGCCACTTTGCATCTTCCGACC
GGCAGTCATTATTGCGGCCCACAAGGAACCCATCTCCGGCTGGATAGACA
ACATGTACGGACCAATGGCAATTCTTTTCGGGGTGGCCCGTGAGTACTGC
GCATTGCCACCATCGATCACCATGCCGAGGCAAGCCTGGTGCCCGTGATT
ATTGTGCCAATTTGACTCTGGCCTGTACCTGAAGACCATTGTGAAGGTAA
CGAGATGGGAACACAAGAAACTCCTCCTCATCTACCAACTGCGCCCATGA
GCAGAACAAGATCACCCACGGGAGTTCATTCGACATGCTCCTCGATGGAC
GCACCACTGCCGCTGACAAAGAATGATATGGTATCCCTTCATCATGCATC
CATGGCGTGTCTTTCCCTGAGCTTCTCTA
UFO05670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17562-RA | 1674 | CG17562-RA | 101..1141 | 9..1043 | 4920 | 98.9 | Plus |
CG17560-RA | 1712 | CG17560-RA | 32..726 | 9..703 | 745 | 74.4 | Plus |
CG14893-RB | 1688 | CG14893-RB | 123..839 | 47..763 | 435 | 71.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16615653..16616164 | 197..708 | 2560 | 100 | Plus |
3R | 32079331 | 3R | 16616222..16616562 | 709..1043 | 1120 | 96.5 | Plus |
3R | 32079331 | 3R | 16615409..16615600 | 9..200 | 960 | 100 | Plus |
3R | 32079331 | 3R | 16618320..16618782 | 241..703 | 575 | 74.9 | Plus |
3R | 32079331 | 3R | 16621289..16621626 | 318..655 | 400 | 74.6 | Plus |
3R | 32079331 | 3R | 12392072..12392238 | 484..318 | 250 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:24 has no hits.
UFO05670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:27:51 Download gff for
UFO05670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17562-RA | 99..1159 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:47 Download gff for
UFO05670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17562-RA | 101..1161 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:07 Download gff for
UFO05670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17562-RA | 101..1161 | 9..1059 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:07 Download gff for
UFO05670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16615409..16615597 | 9..197 | 100 | -> | Plus |
3R | 16615654..16616164 | 198..708 | 100 | -> | Plus |
3R | 16616222..16616564 | 709..1044 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:47 Download gff for
UFO05670.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12441131..12441319 | 9..197 | 100 | -> | Plus |
arm_3R | 12441376..12441886 | 198..708 | 100 | -> | Plus |
arm_3R | 12441944..12442286 | 709..1044 | 96 | -> | Plus |