UFO05673.5prime Sequence
953 bp (819 high quality bases) assembled on 2009-07-15
> UFO05673.5prime
CAGTCGACATGATGGCCTCCAGTGGTGGCGCCTGTTCCCCTTTCGCCTAT
GTGGCCTGGGCGCTGTTTGCCTTGTTGCTGACGCACGGCGGAGACAATGT
TGTGGACGCCCGGCGTAACCAGGGCAACCAGCGGAAGACCTCCTCCTCGT
CAAGCTCCTCCAACTACGGTCACGTGACGCAGCCCAGCTACAACACGAAT
GGCCACGCCGCCGGGAACTCTCATGCAGATGTGGCCAAACTGAGTTACCC
CAACTACAACTCGCAGCCGAATCGACCAATGGCCGCGGGCTCATCAGGGT
CCCCAGGCTCCGCCCCTCAGCCAGGTTGGAATGTGCCGCAGGGTCCGCCG
CCCGCCTACTCCGCTTCCAACCCCGCCGGAGGAGCCCGACCCAACATGCA
CGAGCCGCCGCCAGCCTACCATGCCCCCAACTACGGAGCAGCTCCTCCCA
ACTATGGAGCCGCCACCGGATCGAATGTCCATCAGCCGCAGTACTCTGGA
GTGCCAGCTGGAGCCACCTACTACCCGGCTGCAGGACCCGGCAGTGGCTA
TTCCCCCAATATCCCCGCTGGCGCTACATACTATCCGTCCGCCGGCCATG
TTCCCATGGGCGGTGGCTATCACCCAGCTGCTGCTCCGCCTCCGGGGGCC
ACCTACTACCAGGCGGGATCTGCTTTGCCGCCCGGGAGCCACCTATTATT
CTGCACCACCACAACAGTCCTCCTCTGGCTTGGGCTTCGGACTGGACTGC
TTGCTGGCGGCTTGGGAGGTGCCCTGCTGGGTCACGCCCCTCACTCCCTC
GGGAGGCAGTTCCTCTCGCAGCGTGCCGCAGCTCCAGCTGCTGTCAGATC
CGCATAATCATCATACACGGCGTGCAGTGATGCAGTGATGCACCACTTGA
TAATGCAGCAGTGTGGCTGCTGCCAGACAGTCAGCGCCCAGTCCCTCTCC
AAA
UFO05673.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5273-RB | 2193 | CG5273-RB | 204..1135 | 7..924 | 4195 | 97.9 | Plus |
| CG5273-RC | 2103 | CG5273-RC | 114..1045 | 7..924 | 4195 | 97.9 | Plus |
| CG5273-RA | 2124 | CG5273-RA | 135..1066 | 7..924 | 4195 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 759797..760529 | 7..740 | 3620 | 99.9 | Plus |
| X | 23542271 | X | 760684..760811 | 741..864 | 355 | 92.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:24 has no hits.
UFO05673.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:08 Download gff for
UFO05673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5273-RB | 174..1111 | 1..924 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:28 Download gff for
UFO05673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5273-RA | 129..1066 | 1..924 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:14 Download gff for
UFO05673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5273-RA | 129..1066 | 1..924 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:14 Download gff for
UFO05673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 759791..760528 | 1..739 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:28 Download gff for
UFO05673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 653824..654561 | 1..739 | 99 | -> | Plus |
