UFO05675.5prime Sequence
1069 bp (905 high quality bases) assembled on 2009-07-15
> UFO05675.5prime
CAGTCGACATGGGCAACATACACACGACGGGTCCCAATGAGGCGTTAATT
GTTTCAGGTGGCTGCTGTGGATCGACCAAGAAGCGCACGATTGTGGGCGG
CTGGGCGTGGGCGTGGTGGCTGGTAACCGATGTCCAGCGACTGTCCCTCA
ATGTGATGACCCTGAATCCGATGTGCGAGAATGTGGAAACGTCGCAAGGT
GTTCCGCTAACGGTGACCGGAGTGGCTCAATGCAAGATCATGAAGGCCGA
CGAGCTTCTAGGCACTGCCAGCGAGCAATTCCTTGGAAAGAGCGTCAAGG
AGATCAAGCAGACGATCCTGCAAACCCTCGAAGGACATTTGAGAGCCATA
TTGGGAACGCTTACAGTAGAAGAGGTGTACAAGGACCGCGACCAATTCGC
TGCCTTGGTGCGCGAGGTGGCCGCACCGGACGTGGGTCGTATGGGCATCG
AGATTCTCTCGTTTACGATCAAGGACGTCTACGATGATGTGCAGTACCTG
GCCTCGTTGGGCAAGGCCCAGACCGCCGTGGTCAAGCGGGATGCAGATGC
CGGCGTGGCGGAGGCCAATCGAGATGCCGGTATCCGTGAGGCGGAGTGCG
AAAAGAGCGCCATGGATGTGAAATACTCGACGGACACGAAAATCGAGGAC
AACACCAGGATGTACAAGCTGCAGAAGGCCAATTTCGATCACGAGATCAA
CACGGCCAAGGCCGAATCGCAGTTGGCCTACGAGCTGCAGGCAGCCAAGA
TCCGCCAGCGCATCCGTAACGAGGAGATTCAGATCGAGGTGGTGGAGCGA
CGCAAGCAGATCGAGATTGAGTCGCAGAAGTGCAGCGCAGGATCGCGAGC
TCACTGGCACAGTCAGCTGCCCGCCGAGCCGAGCCTTCCGCCTCCAGACT
CTGCGCAGCAGCAATGTCAGACATCGAGGGTGCCGTGCGAGGCGGACGCA
TACGCAAGATCGATCGCGAGCCATGCATCGAGTGTGGCAGCGAGCGACGC
ATGCGGATGAGCCATGTGTACAAGCAGTACGGAATGCACATATAGAATTG
TATCTCGATGCTGCCAGAT
UFO05675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Flo2-RB | 2780 | CG32593-RB | 147..1201 | 9..1032 | 4530 | 96.9 | Plus |
| Flo2-RF | 2892 | CG32593-RF | 259..1313 | 9..1032 | 4530 | 96.9 | Plus |
| Flo2-RL | 2780 | CG32593-RL | 147..1201 | 9..1032 | 4530 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14930746..14931296 | 354..899 | 2490 | 98.9 | Plus |
| X | 23542271 | X | 14924220..14924414 | 52..246 | 975 | 100 | Plus |
| X | 23542271 | X | 14926764..14926875 | 244..355 | 560 | 100 | Plus |
| X | 23542271 | X | 14840971..14841022 | 9..60 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:47 has no hits.
UFO05675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:10 Download gff for
UFO05675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo-2-RB | 135..1111 | 1..962 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:27 Download gff for
UFO05675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo-2-RL | 137..1113 | 1..962 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:34 Download gff for
UFO05675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo2-RL | 137..1113 | 1..962 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:34 Download gff for
UFO05675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14924221..14924413 | 52..245 | 99 | -> | Plus |
| X | 14926766..14926874 | 246..354 | 100 | -> | Plus |
| X | 14930747..14931311 | 355..914 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:27 Download gff for
UFO05675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14818254..14818446 | 52..245 | 99 | -> | Plus |
| arm_X | 14820799..14820907 | 246..354 | 100 | -> | Plus |
| arm_X | 14824780..14825344 | 355..914 | 98 | -> | Plus |
