UFO05677.5prime Sequence
1072 bp (962 high quality bases) assembled on 2009-07-15
> UFO05677.5prime
CAGTCGACATGGTCATGTCGGAAAACAGCAACATTTCCTACTGCCAGGCG
GTGGCCAATCGCACTTCGTTCTTTACCACCGCCTATAATGGCATTCCGGA
AACCCTAATACTCAACACCATTTTCTGGGTACTCCTGATCCTTTTGTTTA
CGGTTCTGCGGCACCAGGCCGGTGACTTTGGACGTCTAGCGCTGGTCAAC
AGCAACGGCAGCAAGAAGCGCTGGACGGAGATTTTCTACTCGCGCGCCGC
CAGTGTGGTCGATCCCCAGCCGAGCACTTCAACGCAGGTATCGCCTAGAC
CAAGTACCACCTCCCAAGGAGTTCCCGACTCCACGCCCTTGTCCCCTATC
CAGCCGGAGGAGGGGCTTTTCGGCTGGATACGGGTTACGCTGAAGCTGCG
TAAGGAGACCATACTGCTGCATACTGGACCGGATGCCGTGCATTACTTGT
CCTTTCAGCAGCACCTGATGGCTGTAATGGCATTGGTTACCATAGTCTCC
CTGGTCATTATTCTGCCTGTGAATTTCCTGAACGGGCCCAAGGAAAATCC
GTACGATGTGAATGCCTTCGGACGCACCACGATGGCGAATCTTTCTCCGG
ATTCACCTTGGCTGTGGGTGCACACGATCATCACGATTCTGTATATTCCG
CTCGTAGTGCTCATCATGCGGCGCGCCTCGGGACGGAATGCCTTCAAAAA
GGCAGCCACCCGCACGATTATGATTTCAAACATATCCTCCAGCGATCGCA
ACAAGACTGTGGTACGGAACTATATGCAGGAGCTCTTTCCGGACGTCACC
ATCGAGAATGTGTCAATTGCGTACAACATTTCACGACTATACGTAAGGAA
CGCCGAGTTCGAGCGAGTTCATGAGCACGATTGTACTGCGAGCACCATAG
ACAGGATACTCTCATGATAAACCAGAAATGTGTTCTGCAAAAGAGACGCT
ACGATATTATCAGCGGGGAGGAGCGCAGTGTCGGCGATGTTGCCGTCTTG
CTGCTCCACATGATGACCTGGACATGGCGTTTATCACCGTTCACTGTGGC
AGGAGGCCCAGAACATATGTAC
UFO05677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11210-RA | 2863 | CG11210-RA | 178..1258 | 8..1067 | 4740 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8099563..8100456 | 8..900 | 4420 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:12:17 has no hits.
UFO05677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:16 Download gff for
UFO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11210-RA | 177..1260 | 8..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:11 Download gff for
UFO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11210-RA | 178..1261 | 8..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:55 Download gff for
UFO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11210-RA | 178..1261 | 8..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:55 Download gff for
UFO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8099563..8100475 | 8..916 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:11 Download gff for
UFO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3987068..3987980 | 8..916 | 99 | -> | Plus |
