UFO05681.5prime Sequence
1055 bp (916 high quality bases) assembled on 2009-07-15
> UFO05681.5prime
CAGTCGACATGGCCTACAAGTGGGTTCAATCCTCGGCCTACTCCTCCCTT
CCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATA
CGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGTAAGGTGGTGC
CGAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCACTGCCCAAG
GACATCTTCGAGGTGCTGTGCGGTCAGAATTTGGTATGGATCAAGTGCTA
CGATCATGTGATTCCGGAGAATGCTGTACTCTGTGGACGCACATCACTGG
ATCAGCCGGTGTACATTGGTCGTGGTCATTACGAGGGTCATCTGATTATC
GGCAAAATCTCCTCTGTCCATCGAGCTTTGTTCATCGCCTTTCGCGGTGC
CGAACGTCGTCTGGATTCCTATGAGATTTTGGTGGAGGAGCGCAGAGTGG
TTCCTGGCTGGCAGCTGCCGCCACCACCTCCTCCACTAGAGGAGCCGGAA
AAGTGTCCACTATCGCCGCCGCCACCACCTTCTCCACCGGCAATGGCGCC
GCCACTGCCGGCCAAACCATATCCATATCCGGATTTGGCTGCCATGCCAT
TTCCTGACAGGCCTCCGGCCTACACACCCACTCCGGATCCCATGCCACCC
GTTGGAGGTGTGATGGTGATGCCGAGTCCAACCCCACCACCGCCGGCGGG
AGGAGTGCTGGTCATGCCACGACCACCACCACCACCACCGCCTGCAGGTG
GTGTGTTGGTCATGCCACCTCCTCCTCCATCGTTCACTCCAGCTGAAGTG
GCGCCACCGCCATCATTTGTTCCCGCAGAGGTGACCGCAGTATCCGTTCC
CGTGCACCATCGTTTACACCGCTTCCACCTAATAATCCCTACGAAGCGGG
ATGCTCGTCTAACACTCCGCGAGTGTGCTGCTCTCGCAATATGACGCTAC
GCTATGCAAACAACTATGACGTTGGGTTTCAAGCGAACGGCTAATTAATA
ACTCTCCGATGCTGAATGAAGTCAATGAACGCAACATGAAACAATGCTGT
GCGGA
UFO05681.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44251-RA | 1860 | CG44251-RA | 118..1130 | 9..1012 | 4435 | 96.6 | Plus |
| CG44251-RB | 1796 | CG44251-RB | 57..1066 | 12..1012 | 4420 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12949163..12950087 | 933..12 | 4235 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:37:37 has no hits.
UFO05681.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:25 Download gff for
UFO05681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3884-RA | 105..1098 | 1..988 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:25 Download gff for
UFO05681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44251-RA | 112..1105 | 1..988 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:11 Download gff for
UFO05681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44251-RA | 112..1105 | 1..988 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:11 Download gff for
UFO05681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12949103..12950089 | 8..988 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:25 Download gff for
UFO05681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8836608..8837594 | 8..988 | 96 | | Minus |
