UFO05689.5prime Sequence
420 bp (20 high quality bases) assembled on 2009-07-15
> UFO05689.5prime
CAATCCACATGTGGCGAGTGATTCAACTGGGCGCAAGACTCGCGCATCCA
TTCACCATACAACGTCTTAATCAAGTGATTGCCATTCGGCTACAGGATCA
ATCTGTGTGAGAGCGACGAGCTCCGTTTGGACCAACCCTCGTCCTTAAAT
TGGTCGAGCACAATGTCAAGGTCATACTGCACCCGTCCCTTCTTCTTGCC
TACCCCATGCACGCCTACATGCACGCTGGAGCTCATATTCACGAGGACAT
CCTTGATGCTTCGGAGATATTCGAATTGAAACAGGTGCCCATAAATGCAC
TGATTCCTGGGAAGACGTACTGCTTCTTTTCACACACGATTAAAGCGCAG
GAATCAAATATGCCGCTTCTGGATGCTATTTTGGATTTAAAATTCGGCTC
ATCGACTATGAGCGAATCAT
UFO05689.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LKR-RB | 3495 | CG7144-RB | 124..538 | 7..420 | 1450 | 90.1 | Plus |
| LKR-RA | 3264 | CG7144-RA | 124..538 | 7..420 | 1450 | 90.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7794596..7794768 | 385..213 | 700 | 93.6 | Minus |
| 2L | 23513712 | 2L | 7795511..7795648 | 211..74 | 435 | 87.7 | Minus |
| 2L | 23513712 | 2L | 7795777..7795836 | 66..7 | 225 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:08:01 has no hits.
UFO05689.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-08-02 18:28:36 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-05 00:52:20 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:50:38 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:38 Download gff for
UFO05689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7794495..7794526 | 389..420 | 100 | <- | Minus |
| 2L | 7794592..7794768 | 213..388 | 91 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:20 Download gff for
UFO05689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7794495..7794526 | 389..420 | 100 | <- | Minus |
| arm_2L | 7794592..7794768 | 213..388 | 91 | <- | Minus |
