UFO05695.5prime Sequence
1070 bp (965 high quality bases) assembled on 2009-07-15
> UFO05695.5prime
CAGTCGACATGGACGCGAGCAGATACAAGGTCGACGGCGAGAACGACAAT
TGCGGGGCGACCTTGGCCGCTGTAAATCTGAATGTCCTTCCCGATGAGAT
ACTGGAGTTCATATTCACCTACCTGCCACCCTACGGCGACTTGGAGCACT
GCAGCCTGGTGTGCAAGCGATGGCACGCCATTGTGAAGAACCTTGTGCGT
CGTTCCAGACACAATCTCGAGAAGGGCCTCATCGACTTTCGACTGCGCTG
GGAGGTGTTTTCCCAGCAGACAGTCAATGGCGGGGCAGGAGCACTATTAT
CCTTTATTGCCGGAAGATTTGCTCATTCGGCTGTGCGGCAAGACAACTCC
ATGTACGTATTCGGCGGTGGATCCTCGTCGGACACCACCTTCAACGATCT
GTGGCGCTTTGATTTGACGCACATGCGGTGGGCGCGGCCAGTGGCCACAG
GAACCTATCCCTCGCCCAAGGGCAGTGCATCAATGGTGGCGTGGCGGAAC
CAGCTGATACTCTTTGGCGGATGGCGATACCCCTCGCTACATCCGCCCTA
CCAACCATGGTGCTTATTTGACGAGCTGCACTACTACGATCTTGGAAAGA
ACCGTTGGCTGCTGCGAAGCTCCCTATCTTCCCCACCACCGATGGCTGGA
CACTCGGCCACGGTACATGGCGATCGGATGGTAGTTTTTGGTGGTTACCA
GATCAAAGACGATTTCAATGTGAACTCGAACGACACATGGGTACTGGATC
TGCCGGAGCAGCGCTGGTGGCAGCCGCTCTTTGTGGGCAACACGCGACCC
AGTCCGCGATACGGACAAATACAGTGGAGTTGGGAAGGAACCATCTGCTG
ATCGTGGAGGATGTGGCGTGCCAATCGCGTGTACACTGATGCCTGCTGCT
GGACATGACCAGGATGTATGGAGCTGGAAGTCTATGCTGTGGCGCAACAA
GCGCTTGGAGCCGTCCACATGTGGTGCATCCCGTTGCAAGTCAACAACTA
CCTGTGGTCTGGTCCATCGCCCAACATGCCGCAAGACTCCATGATGAGCA
AGGCAGGTCCCCGTTCTTGA
UFO05695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6758-RA | 2392 | CG6758-RA | 216..1288 | 9..1064 | 4860 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22175376..22176236 | 190..1038 | 3610 | 97.3 | Plus |
| 2R | 25286936 | 2R | 22175137..22175317 | 9..189 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:29:03 has no hits.
UFO05695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:28 Download gff for
UFO05695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6758-RA | 229..1290 | 2..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:30 Download gff for
UFO05695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6758-RA | 213..1274 | 2..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:46 Download gff for
UFO05695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6758-RA | 213..1274 | 2..1051 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:46 Download gff for
UFO05695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22175134..22175317 | 2..189 | 97 | -> | Plus |
| 2R | 22175376..22176238 | 190..1039 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:30 Download gff for
UFO05695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18062881..18063743 | 190..1039 | 98 | <- | Plus |
| arm_2R | 18062639..18062822 | 2..189 | 97 | -> | Plus |
