UFO05696.5prime Sequence
394 bp (281 high quality bases) assembled on 2009-07-15
> UFO05696.5prime
CAGTCGACATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAG
AAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATG
TAAACAATCGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCG
AGATCTCGCCCAAGTCAAATCTAAAGCATCTGTACGACAGCGTTCAGAAT
GCCCTGAAGGTGGATGGATTTGGTCTCTTCAAGGAGCGCAAACTTCCTCC
CAGAGCTGCAGGGCAAGTGGCTCCCAGCTGGGTGGGGGACTTTCCTTTGA
AGGCATGGCCGACATGGTCTACTTTAAAACCCAAATGGGTTGGAACTTCA
CCCCCGCCCCCACTAAGCACCAATTGTTCCGGGACAAGTCAGGG
UFO05696.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Npl4-RA | 2362 | CG4673-RA | 167..478 | 9..328 | 1370 | 96.9 | Plus |
Npl4-RD | 2168 | CG4673-RD | 75..284 | 111..328 | 860 | 95.4 | Plus |
Npl4-RB | 2208 | CG4673-RB | 75..284 | 111..328 | 860 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25623237..25623406 | 281..110 | 745 | 98.3 | Minus |
3R | 32079331 | 3R | 25623478..25623579 | 110..9 | 510 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:03:49 has no hits.
UFO05696.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:28:30 Download gff for
UFO05696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4673-RA | 153..477 | 1..338 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:42 Download gff for
UFO05696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Npl4-RA | 161..485 | 1..338 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:37 Download gff for
UFO05696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Npl4-RA | 161..485 | 1..338 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:37 Download gff for
UFO05696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25623478..25623585 | 1..110 | 96 | | Minus |
3R | 25623189..25623405 | 111..338 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:42 Download gff for
UFO05696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21449200..21449307 | 1..110 | 96 | | Minus |
arm_3R | 21448911..21449127 | 111..338 | 94 | <- | Minus |