UFO05703.5prime Sequence
1135 bp (1006 high quality bases) assembled on 2010-12-10
> UFO05703.5prime
CAGTCGACATGGAAATGGACGTCAATCGCCCGACCGGCCGCCATGGCAAC
CTAATGACCATATCCGCCCGCTGCTCCAACAACAATGCAGCCGAAGCCGG
AGCCGGAGTTGGAGCCACCAGGACTCCGGCCGCCGGAAGTGAGGCGCCGC
CCAGCGGCTGCTGCGGCATCTTGGGCCGCCTCCTCTGCGTGAGTCGCCAC
AAGGCCACGCAATCGGTGGCGGGCAGCGATCCCTTCTCCCAGCTGCAGTT
GCAGCGCAAGGGAGTCGCCACACCTGCTGCCGTTTCCGGACAGCGACGCC
GCCGGACGCCGCAGGAAATCTACTTCGAGAGTCGCGGCAAGTCCTGCAAG
AAGCTGCTTAAATTCAATGGCAATTCCAACAAGATACTGCTGTATCCCGA
GGAGGGCTGGGCGAGGACCGCCTCATCCAGTTACTGGACCATCACGCCCT
GCTTCTGGCAGCCCAATCGCTGCCGCATCGTCGAGTGCTCCGGAACCCAA
CGGCGCGCGACGAAAGCCCGGATGCTGCCGCTGGAGCAGCAGGGATCCCT
CCTGATTGCCGGACACTTTCGCCGGACGACGGCGGGGGGCGGAGGAGCTG
CATCGCCAGCGGGGGGCGGGGCATCGGGCAACGGTTCGGTGGCTGCCACG
CCCACGCCCGCAATACCTGCCGATGCAATCCGGACGGGGTCAACGGGCTG
TGACAAGTCGCAGCCCGCGTGGAACGACGAGTTCAAGCTGTATCTGACGT
CGAACATCTCGATGGAGGACTACAACATGGGCTACTGCCTCACCGGATTC
GTGGAGCGCCGCTGCCAGGTGACCAACACCTTCCAGATGACTCACTTTGC
GGTCATCAAGCGCCAGTGGCCACCGTCGCCGTCCAACCTGTGCAACTCCG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
ATCATATCATATCATAATCATATCACACTAGCCTAGAGATCTGTCATGAC
TAGTGCTGATTCTCACCAATAAAAACGCCGGCGGCACGAGCGTTCTGAAC
AATCAGATGGGAGTTCTGAGTCATACTGGATCTTTTCAACAGGAGTTCAA
GCAGCTCGAATTCATAAGCCGCTGGCCCTCATCGA
UFO05703.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30419-RA | 3812 | CG30419-RA | 341..1233 | 7..899 | 4450 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24215070..24215587 | 899..382 | 2575 | 99.8 | Minus |
| 2R | 25286936 | 2R | 24229079..24229455 | 383..7 | 1885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:19:39 has no hits.
UFO05703.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:38 Download gff for
UFO05703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30419-RA | 327..1230 | 1..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:34 Download gff for
UFO05703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30419-RA | 334..1237 | 1..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:26 Download gff for
UFO05703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30419-RA | 334..1237 | 1..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:26 Download gff for
UFO05703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24229079..24229460 | 1..383 | 99 | | Minus |
| 2R | 24215066..24215585 | 384..904 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:34 Download gff for
UFO05703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20102589..20103108 | 384..904 | 99 | <- | Minus |
| arm_2R | 20116602..20116983 | 1..383 | 99 | | Minus |
