UFO05715.5prime Sequence
1122 bp (1017 high quality bases) assembled on 2010-12-10
> UFO05715.5prime
CAGTCGACATGAACGATCCAAACAAGGCTATTAGTGTGAATCTTTCCTCG
CTGCTCAGCCTGAAGGCGGAATTGCTGCGGAAACAGCATGAGGTGAGGGT
GGCCAAGGCCACAAAGGCATCCGCCGCCGACTTTCGCCCCACCAAGAGCG
CCGGCAACAAGGAAAAGTCCAGTGATCAGGGCTACAAAAAGGTCGCAAGC
AGCGACGATGGTGCCAAAGTGTACGAGGCCGAGGACCATGCTCAGTTGGA
GAAGTCACGGCGCATCCTGGAGGCCAAGAGTAAGTTCTACGACCGGATGA
GCCGCAATGGAGGCAGCCTCAACTCCGATGACAATTGCCTGGTGATGTTC
AACCGCAAAAAACAGGAGGCAGATCGGGAGCCGGAGCAGTGCACGCAGAG
ACGTGAGTCCCGCCAGCGACTGAGTAGCAGCAGCAGTTCCAGCCAAGATG
AAGAAGGCCACGACGATTTAGAGGTGGAGTACGTTGACTGCCTGGGACGC
ACCAGAAAGTGTTTGCGGAAGGACTTGAAGGAGGCCAAGAGACGCGACAA
GCAACTTGCCGAGAGCATGCCGGAGCGCCTAGATCAGACCAAGGCCAACT
GGATGATAAATACCAAAGGAAGCCGCGAGCTGAATAGTAACCACAACAGC
GATGATGAGTCCTTCATTGGGCCGCGTCCAACGGAGAGCGTCTTCAGCGA
AGCCCTGTCCACGATGACGAAGCACGACGAACAGCGCATGAACTGGGAGC
GCAAGGAGCAGGAGAATTTTGAAAAGCCTGATGTCCACTACCAGGATGTC
TTCTTTGACGAAGCGCGCACCCACGGTGTTGGCTACTATGCCTTCTCCAC
GGACGAGACGAGCGCCGACAGCAGCAGTTGGATCTGGAAAAGGCACGCCA
AGCAACGAAGCTAAGCAGATGCGACGAGATGATTGCGCGCCCAACGAGAC
GTCTCGTGCGATCGCGTGCTGCCGCCAAAACAGATTCGAGACGCACGGCT
GCCACCCATCAGCGAGGAGACTACTGCGGAGAACAGCAAGAAGACGATTG
GCGAGAGAGCAACTAATCGGGCGGAACAAGAAAGGAGGCAGCATCGAGCG
TAAAAGAAGAGAGGCGTAACTG
UFO05715.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7183-RB | 2121 | CG7183-RB | 45..1170 | 9..1105 | 4915 | 97.2 | Plus |
| CG7183-RA | 2367 | CG7183-RA | 291..1416 | 9..1105 | 4915 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18219279..18220223 | 950..9 | 4575 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:19:55 has no hits.
UFO05715.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:41 Download gff for
UFO05715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7183-RA | 287..1312 | 1..1018 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:46 Download gff for
UFO05715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7183-RA | 287..1312 | 1..1018 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:35 Download gff for
UFO05715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7183-RA | 287..1312 | 1..1018 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:35 Download gff for
UFO05715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18219202..18220227 | 1..1018 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:46 Download gff for
UFO05715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14044924..14045949 | 1..1018 | 98 | | Minus |
