UFO05725.5prime Sequence
1095 bp (1007 high quality bases) assembled on 2010-12-10
> UFO05725.5prime
CAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTCTTATCGTT
GTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTTTTCGAAGG
AACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATATTACCATTG
AAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATGTCCTCAAG
GAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAACTGGAAAG
AGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCTGAAATCAA
TGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCATGGAGAAG
GCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATATGTGCATT
CAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACAAATACAAG
AGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGTTTGATTAC
GATACCATCGATTTAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAA
CGGGGGCGAGAGTTGTCCATATTGCCACGTTTAAATCAAACTGTGAAACT
CACCCAGGGATGCTGAGACGAAAACATATCTCATAACCCTTTAGGAATAG
CCAGGTTTTCACGTACACGCCACATCTGCGAATATATGTGTAGACTGCGG
AAATCGTCTTGCATTCATTCGGAGCGATGAACGTTCAGTGCATGA
UFO05725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57a-RA | 558 | CG30141-RA | 20..526 | 9..515 | 2535 | 100 | Plus |
| Obp57b-RB | 823 | CG30142-RB | 142..407 | 135..400 | 250 | 74.3 | Plus |
| Obp57b-RA | 477 | CG30142-RA | 142..407 | 135..400 | 250 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20505281..20505726 | 70..515 | 2230 | 100 | Plus |
| 2R | 25286936 | 2R | 20505169..20505232 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:20:05 has no hits.
UFO05725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:43 Download gff for
UFO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57a-RA | 1..512 | 8..519 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:53 Download gff for
UFO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57a-RA | 11..529 | 1..519 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:41 Download gff for
UFO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57a-RA | 11..529 | 1..519 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:41 Download gff for
UFO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20505160..20505231 | 1..71 | 94 | -> | Plus |
| 2R | 20505283..20505726 | 72..515 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:53 Download gff for
UFO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16392665..16392736 | 1..71 | 94 | -> | Plus |
| arm_2R | 16392788..16393231 | 72..515 | 100 | == | Plus |
