UFO05726.5prime Sequence
1105 bp (1009 high quality bases) assembled on 2010-12-10
> UFO05726.5prime
CAGTCGACATGGCGGAATCTGACTCCGGAGAAAGTACGTCGTCGGTGTCC
TCGTTTATATCCTCATCGTCGTCTTCGCGATTAAGTGAGTTTGTGGACGC
AAAGACAGAACTGCAGGATATATATCACGATTTGAGTAATTACCTGTCCA
ATTTCCTAACCATTTTGGAGGAGACTGTCCTGTTAAAAGATCGACAAATG
CTGGAGCACCTGTGCGCCTTCTCCAGCAGGGTGGAGGCCATTGCAAAGGT
TCTTTCACGTGATCGAATGAAGGTGGCATTTTTTGGACGCACCTCAAATG
GAAAAAGTGCCGTGATCAATGCACTTCTGCATGAAAAAATCCTGCCCAGC
GCCATGGGCCATACCACCAGCTGTTTTTGTCAAGTGCAAGCTAATGGCTC
GAATGAAACCGAGCACGTAAAGGTCGAGCAGGAGGATGAGCATATGGAAC
TGAGTGCCCTAAGCCAACTGGCCAGTGCACATTCTCCTGGGGCCCTAAAA
CCCTCAACTCTGCTGCAGGTCAATATGGCCAAGAACCGTTGCTCGATATT
GGATTACGATGTGGTTTTGATGGATACACCTGGAGTGGATGTAACAGCGC
AACTGGACGATTGCCTAGATAGCTACTGCATGGATGCGGATGTTTTCATT
CTAGTTCTCAACGCCGAGTCCACTGTTTCGCGCGTGGAAAGGCAGTTCTT
CAAGGACGTGGCATCCAAACTCTCGCGTCCAAATCTCTTTATACTCAACA
ATCGATGGGATAAAGCCAGCAGTCTGGAGCCGGAAATGGAGCAGAAGGTA
AAGGATCAGCATATGGAACGTTGCGTTAACCTGCTCGTGGATGAATTAGT
GTTTATTCAACTGCACAGGAAGCGTGGAAAGGATCTATCATGTTTCAGCA
CTGGAGCATTGCATATAAGAATGGTCAGATTACGAATCCCTCGGGACAAC
CCACAGCGATATCAGAGTTTCTGCGTTCGAAAATGATTTTCGAATTGCCT
CCCGGTGTCAGCGTTAAAACAATTGTCCAACTGCTAGTGGCGCGAAAGAT
TTTAACAGTAATCACTCTGATATGCCCTTTCAAGAAGGTAGTCGTCTTAC
GATGA
UFO05726.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzo-RA | 2391 | CG4568-RA | 74..1197 | 9..1105 | 4895 | 97 | Plus |
| Marf-RD | 3617 | CG3869-RD | 920..1039 | 267..386 | 180 | 76.7 | Plus |
| Marf-RC | 3605 | CG3869-RC | 920..1039 | 267..386 | 180 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23202942..23203961 | 1019..9 | 4640 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:20:09 has no hits.
UFO05726.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:43 Download gff for
UFO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzo-RA | 70..1093 | 1..1019 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:54 Download gff for
UFO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzo-RA | 70..1093 | 1..1019 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:42 Download gff for
UFO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzo-RA | 70..1093 | 1..1019 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:42 Download gff for
UFO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23202942..23203965 | 1..1019 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:54 Download gff for
UFO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19028664..19029687 | 1..1019 | 98 | | Minus |
