UFO05732.5prime Sequence
1131 bp (1026 high quality bases) assembled on 2010-12-10
> UFO05732.5prime
CAGTCGACATGAATGTGGATCTGAGATTGATTGTGCGCCTGTTGCTGGCC
ATTCTATTGACTTCCTTGGTAACTACCATTTTAATGGGCAAGCAGATACA
CAGAAGACTCGTGAAGTCCATGGTCAAAACAACCGGCGAAAAGGATAGTT
TGCCAGCAAGGCAGCTCCCAAAAAGGGAGATCAGCCCGAAGGTCGCAGAT
TTCCCACCACCACTAACACTGAACCAAACTGAACTGGACATCTTAAAGAT
CCAGCGAAACAATAGTTTCCGCCTGCCCCAGCAAGAAGCTATTAAGGAGT
GGCAGGATGCGATTTTCTTTAAAGAGGATAGTAACCGCAGGGGATTGGGT
GAGCAGGGAAGAGCAGTTCAGTTACCAAACGCTAAATTAAACCCCGATGA
TTTCCAAGACTTCTATGCCGAACTCTCCGATCGCATTCCCCTGAACAGAT
CCTTGCCGGATACCAGACCTATAAGTTGCCGGAAACGGAAGTATCTGGAG
AACCTACCCAATGTGACAGTGATAATAGCCTTTCACGATGAACACCTAAG
CGTTTTGCTAAGATCTATAACGAGCATTATAAATCGATCTCCTGTTGAGT
TACTCAAGCAGATTGTGCTCGTGGATGACGATAGTAATTTGCCGGAATTG
GGACAACAACTGGAAGAGATTGTGGCTCAAAACTTTCCGAAAATTATTCA
CATACTAAGACTTCCAGAACGACGTGGTTCCATCAAAGCGAGAATGGAGG
CAATCAGGGTGTCCAGCTGTCAAGTTTTGGTCTTTCTAGACTCCCACATC
GAAGTCAACACCAATTGGTTGCCTCCCTTGCTGGAACCTATAGTTATTAA
CCCACATATAGTCACCCGTCCCATTTTGGATGCCATCTCACGCAAGACAT
TTGCCTATGCCAAACAAAATACGATGACTCCGCTCCGGTTTCAATTGGTG
GCCTTGAGTCTGAAAGCTTACCAATTTTTTCCTGAAGAAAAAGTCCTGAT
TCCCCACCCTACCGTACACCGGTTTATCAGGAGCTATGGCGATTGACAGG
AACTATTTCTTGAATCTTGGGGGGAATTGAATGAAACACTGACACCTGGG
AGCGAAAGTCGAATAGTTTTAGGCTGATTGT
UFO05732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31776-RA | 1964 | CG31776-RA | 32..1102 | 8..1080 | 5165 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3470213..3470680 | 8..475 | 2340 | 100 | Plus |
| 2L | 23513712 | 2L | 3470732..3471076 | 474..818 | 1725 | 100 | Plus |
| 2L | 23513712 | 2L | 3471136..3471390 | 818..1073 | 980 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:20:18 has no hits.
UFO05732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:45 Download gff for
UFO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31776-RA | 26..1108 | 1..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:28:00 Download gff for
UFO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31776-RA | 26..1108 | 1..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:49 Download gff for
UFO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31776-RA | 26..1108 | 1..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:49 Download gff for
UFO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3470734..3471076 | 476..818 | 100 | -> | Plus |
| 2L | 3471137..3471399 | 819..1081 | 95 | -> | Plus |
| 2L | 3470207..3470680 | 1..475 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:28:00 Download gff for
UFO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3470734..3471076 | 476..818 | 100 | -> | Plus |
| arm_2L | 3470207..3470680 | 1..475 | 99 | -> | Plus |
| arm_2L | 3471137..3471399 | 819..1081 | 95 | -> | Plus |
