Clone UFO05737 Report

Search the DGRC for UFO05737

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:57
Well:37
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptena-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05737.5prime Sequence

1115 bp (1020 high quality bases) assembled on 2010-12-10

> UFO05737.5prime
CAGTCGACATGACTGAGCAGAGTATTATCGGGGCGCGGGCCTCTGTGATG
GTGTACGATGACAACCAGAAGAAGTGGGTGCCATCGGGCAGCTCGTCGGG
ATTGAGCAAGGTGCAGATCTACCACCACCAGCAGAACAACACGTTCCGTG
TGGTGGGACGAAAGCTGCAGGATCACGAGGTGGTCATCAACTGCTCCATT
CTGAAGGGACTGAAGTACAATCAGGCCACGGCAACATTTCATCAGTGGCG
CGATTCGAAATTCGTTTACGGCTTGAACTTCTCGAGCCAAAATGATGCGG
AGAACTTTGCTAGGGCCATGATGCATGCCCTGGAAGTGCTCAGTGGTCGC
GTGGCGAACAACCCAGGTGGACCGCCCACAAATGGCAATGGCTATGAGGA
GGACATGGGCTATCGCACGATGACCAGCGAGGATGCAGCCATACTGCGTC
AGAACAACAGCATAGGTGGGCACGTCACGCCCTCGGCCCAGACGCCCACC
TCGCAGACCAACCAGAATAACATCCCCCAGAGCCCGCCGACGCCCCAGGG
TCATCATCGCACCAGCAGGAATTCCCTCAGCGCCCCACCGGCACCACAGC
CCCAACAGCAGCAGCAGCAGCAGCAGGCGCAGCAAATGGGTCAGCCAGGA
TCCCACTATGGACCCACTGGAAATGGACCCACTTCGAATGGCCTGCCACA
GCAGGTGAACTCACAGATTCCGCCGGCACCGCAGCAGCAGCCACAACAGC
AACAGTTTCAGCAGCAGCAGCAGCAACAGCAATATCAGCAAATGGTCCAG
GCGGGCTATGCGCCCTCTCAGTATCAGCAACCCCACTACGTGCTCTCCAA
TTCTAATCCCAATCTAACTGTGCACCAATACCCGACACAGCAGGCGCAGC
AGCAGCCACCGCAAGCGCCACAGCCGCCGCCTCCAGACGGTGGATGTACA
TGGTGGGTCATGTCATCTACCGAGCTCGCGAGCGCCAACAGTGTGTGTAC
GCCAGCAGCAGCAGATGCTCCCGCAGCGCATCACAGGCACCTCAGCGCGA
CGATGCAGTCTGGCTACGTGTTCCACAGTACCTCCGGCCCAGACACAGCC
AGAATCGGTACGATC

UFO05737.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
ena-RD 2878 CG15112-RD 406..1503 9..1092 5050 98.3 Plus
ena-RB 3669 CG15112-RB 695..1790 14..1092 4985 98 Plus
ena-RE 3446 CG15112-RE 482..1570 9..1092 4820 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19158734..19159057 14..337 1620 100 Plus
2R 25286936 2R 19159781..19160035 567..821 1275 100 Plus
2R 25286936 2R 19159120..19159353 336..569 1170 100 Plus
2R 25286936 2R 19160177..19160410 819..1045 745 94.9 Plus
Blast to na_te.dros performed 2014-11-26 17:20:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2543 695..938 206 56.3 Plus

UFO05737.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:47 Download gff for UFO05737.5prime
Subject Subject Range Query Range Percent Splice Strand
ena-RD 393..1458 9..1063 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:28:07 Download gff for UFO05737.5prime
Subject Subject Range Query Range Percent Splice Strand
ena-RD 406..1471 9..1063 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:54 Download gff for UFO05737.5prime
Subject Subject Range Query Range Percent Splice Strand
ena-RD 406..1471 9..1063 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:54 Download gff for UFO05737.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19160180..19160432 822..1063 94   Plus
2R 19158734..19159055 14..335 100 -> Plus
2R 19159120..19159352 336..568 100 -> Plus
2R 19159783..19160035 569..821 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:28:07 Download gff for UFO05737.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15046239..15046560 14..335 100 -> Plus
arm_2R 15046625..15046857 336..568 100 -> Plus
arm_2R 15047288..15047540 569..821 100 -> Plus
arm_2R 15047685..15047937 822..1063 94   Plus