UFO05746.5prime Sequence
1098 bp (989 high quality bases) assembled on 2010-12-10
> UFO05746.5prime
CAGTCGACATGGAGAAAACGGAAAATACTAAAAATTCTCGCACCACCTAC
GAAGTGCAAAGGGATTTTGGCTTCAGCAGTGGGCTGCGTTCGGAAATTAT
TTGGGATTCACTAGCCCCGGATCAGGGTGATGTTCTAAAGCAAAAGATAG
AGAACCTCATTCGCGATGATGACGCCCGCAATGGCAAGGCGATTCAACGA
AAGCGGGAGCAGCTTTTCCGGAATATTTGGCAGCAGCGCTGTTACACCAA
CGGCACATTGCTCTCCGCCATAATTTACGTGCTAGTCACGCCGGATACAG
ACCCGGAATCGGCGCTGCAGTCTACCAACTACTCCTGTCACCCGGTTTTT
CGCACACGGCGCTGTTTGAAGGGCGAGAACAGCGCCGCTTGTTGCATGAT
TTTTGTGGACGAAAATGCACGGGTCTACGCCAATTGGGAGCAGTTCGTCT
TCCGGAACACCTTGCCCAAGGGCTTGATGATCGCCCCTAGCCAAGGAATT
TACACATTCACCGGCGACGAGGAGCCGGGCGTCCAGTTGATGGTCCATCC
AACGCCAGCAGCACGTGCCAGGTATAAAATTCTGAATGCTGGCGATAAAG
TCGCCACTGTTGGTAGCTTGGTGGCCAGTGTTCCGGCGGCTGCAGCTTTG
GCTGTGCCTCTGGGCGCTCCGCTCGCGATTGCCGCCACCGCTGTGGGCGT
GGCCACCGGAGTCTACAGCACCCTGCGCTCTGCCTCCCATCTTATCGATC
GTCGACGGCACGGACAGTCCACCTGCATCACGGATACCGAGGCACGCAGC
TCTTGTTTGGGCGTAGCAGGTGGCGTTGTGGGTCTAGGAGCCAGTGGGGC
CACAAAAGCTCTGTCCACCGCTGCAGAGCTGGCTACAAAGTTAATCCCGC
TGCGCAGTTAGCCGTTAGGGGGATAAATGGTGCCTCATGGTCATCGCCGG
AACGGTGTTAGCGAATGTTGTTTACGATTATATTCGAAACATGAGATGAA
CCAGCCAATAACAGCTTGGAATGACTGAGAAATGGCCCTCGCACCCTGTG
GAATTCACTCAATCAATCACAAATGGGCATCGCTTTCAAGCTAACAAC
UFO05746.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7730-RC | 2123 | CG7730-RC | 155..1249 | 9..1098 | 4945 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17027828..17028699 | 110..979 | 4185 | 99.2 | Plus |
| 3L | 28110227 | 3L | 17027669..17027769 | 9..109 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:20:22 has no hits.
UFO05746.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:46 Download gff for
UFO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7730-RC | 143..1172 | 1..1028 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:28:02 Download gff for
UFO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7730-RC | 149..1178 | 1..1028 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:50 Download gff for
UFO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7730-RC | 149..1178 | 1..1028 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:50 Download gff for
UFO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17027663..17027769 | 1..109 | 96 | -> | Plus |
| 3L | 17027828..17028707 | 110..986 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:28:02 Download gff for
UFO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17020763..17020869 | 1..109 | 96 | -> | Plus |
| arm_3L | 17020928..17021807 | 110..986 | 99 | | Plus |
