UFO05754.5prime Sequence
1105 bp (1006 high quality bases) assembled on 2010-12-10
> UFO05754.5prime
CAGTCGACATGTCGAAAAGTTCCGGGCGCGATCGAGACAGGGAGCGCGAC
CGGGAGAGAGAGAGGGAGCGCGACCGTGAGAGAGAGCGCGACAGGGATCG
TGAGCGGGACAACCGGCACGACAGTCGCAGTCGCGACTATGATATGGGCA
AGTCCAGGAACGGTGGAGGCGGCGGAGCCGGTGGTGGCTCCCGGAACATG
CGCGAAGACCGGAAGCGCGGAAAGGACATGATCAGCGATCGTGGAAAACG
CGACGATAAGCGGAGGAAGTGCTCCAGGTCAAAGGATTACGAGAAGGACA
ATTCGCCCCACTACAGGCGTCTGGACAAGGATCGTGACCGTGATCGGGAT
CGCGATCGGCAGCGAGAGAAGGAACGAGAGCGCGAGAAGGAAAAGGAGCG
CGAGAAGGAAAAGGAGCGCGAGCGGGACAAGGATCGGGAGCGAGATCGCC
AGCGAGAAAAGGAATCCGATAGCAGACGAGCGGCCGCAGCTGCTCCGCTG
ATTATACCATTGCTCTCGACCAGCTGCTCCGAAGAGGAGGTGGAGGAGAT
CGACAAGGAGGAGCAGCAGCGTCGTCTGGAGCAAGAGATGATTAAGCGGC
GCGAGCGAATCGAACGTTGGCGCGCGGAACGCAAGCGGGACACTAAGGCG
GCTGTCGTGGCGCCGTCGCTGGTCAATTCCGCAAAGAAATGGAGTCTGGA
GGACGAGTCTGAGGAGGACGACAGCAATCCCGCTCCGCCGCTGGACAGTG
GGAAAAAGGACGCCGAACCGGACTCGCCGCCTTCAAAATTCCACAGCATA
CGCAAGCGCTTCGACGATGACGTGGTCGAGTCGAAGTTCTCGCCCGTTAA
GCGTCCCACCTTTAGCAATCATTTGGCAATTGGGCATTGGCCCTGGCCAC
CAAGCCGAGGCGGATATCAAGAGGAGCCACCGCCGGTGGACACCAAAAAG
GAGATCAAAAGAGCCGACCAGTAGCGGCCAAATGGAGATCGTTGAGAGCC
CACCGTCGCCGCAGGGGAGAAAGAACAGAGGAGCCGACAGCCCGCATGTG
GGTGCTATCGATCGGAATGGAAGAACAGCGCACCGAGCGACGAGACGAAT
CGATC
UFO05754.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6227-RA | 4251 | CG6227-RA | 237..1297 | 8..1057 | 4875 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15346098..15346826 | 302..1021 | 3135 | 97.3 | Plus |
| X | 23542271 | X | 15345487..15345763 | 25..301 | 1385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:18:24 has no hits.
UFO05754.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:24 Download gff for
UFO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6227-RA | 281..1354 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:43 Download gff for
UFO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6227-RA | 231..1304 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:42 Download gff for
UFO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6227-RA | 231..1304 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:42 Download gff for
UFO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15345488..15345763 | 26..301 | 100 | -> | Plus |
| X | 15346098..15346871 | 302..1066 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:43 Download gff for
UFO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15239521..15239796 | 26..301 | 100 | -> | Plus |
| arm_X | 15240131..15240904 | 302..1066 | 97 | -> | Plus |
