UFO05760.5prime Sequence
1061 bp (961 high quality bases) assembled on 2010-12-10
> UFO05760.5prime
CAGTCGACATGCATTCCGCGATCCTGGAGGACTCGCCCAACGCGCGCATC
AACAAGACGATCCTCGATCGCTATCTTTCACTGCCGCTGCAGGAGAACAT
CGTTCAGGCCACCTACGTGTGGATCGATGGCACCGGCGAGGATTTGCGCT
GCAAGGATCGCACCCTCGACTTCATTCCCCAGAGTCCCAAGGAGCTACCC
GTTTGGAACTACGATGGAAGCTCGTGCTACCAGGCCGAGGGATCCAACTC
GGACACCTACCTGTATCCGGTGGCCATCTACAAGGACCCGTTCCGGCGCG
GCAACAACATCCTGGTGATGTGCGACACCTACAAGTTCGACGGCACCCCC
ACGGACACCAACAAGCGCAAGACCTGCCTGGAGGTGGCCAACAAGTGCGC
CGCAAAGGAGCCCTGGTTCGGTATTGAGCAGGAGTACACCTTCCTCGACT
TTGATGGCCATCCATTGGGCTGGCCCAAGAACGGTTTCCCCGGACCCCAG
GGACCCTACTATTGCGGCGTTGGTGCCAACAAGGTCTACGCCCGCGACAT
TGTGGATGCCCACTATCGCGCCTGTCTGTACGCCGGCATCAAGGTGTCCG
GCACCAATGCCGAGGTGATGCCCGCCCAGTGGGAGTTCCAGGTGGGACCC
TGCGAGGGCATCTCCATTGGTGATGATCTCTGGATGGCCCGTTTCCTCTT
GCATCGCATCTCCGAGGAGTTTGGCATTGTGTCCACTCTGGATCCCAAGC
CGATGCCTGGCGATTGGAACGGTGCTGGTGCCCACACCAATGTGTCGACG
AACGCAATGCGCGAAGATGGCGGCATTCGGGACATTGAGAAGCGGTGGCC
AAGCTGTCCAAGTGCCACGAGAGGCACATTCGCGCCTACGATCCCCAAGC
AAGGACAGGACAATGCCCGTCGTCTGACCGGAAAGCACGAGACGAGCTCC
ATCAACGAATTTCATTGCCGGCGTGGGCCAATCACGGAAGCGAGCATAAC
ACATTCCTTTCCGGGCGTCAATGAATGTATGGGCAAGGGCTAATTTTCTA
AGGATGCCGGT
UFO05760.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gs2-RB | 1906 | CG1743-RB | 231..1255 | 9..1042 | 4775 | 98.1 | Plus |
Gs2-RF | 1990 | CG1743-RF | 326..1339 | 20..1042 | 4720 | 98 | Plus |
Gs2-RE | 1829 | CG1743-RE | 165..1178 | 20..1042 | 4720 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11428528..11428871 | 192..535 | 1705 | 99.7 | Plus |
X | 23542271 | X | 11429239..11429488 | 726..976 | 1065 | 97.6 | Plus |
X | 23542271 | X | 11428980..11429173 | 532..725 | 970 | 100 | Plus |
X | 23542271 | X | 11424282..11424454 | 20..192 | 865 | 100 | Plus |
2L | 23513712 | 2L | 132973..133207 | 406..640 | 380 | 77.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:18:14 has no hits.
UFO05760.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:23 Download gff for
UFO05760.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gs2-RB | 201..1203 | 1..1008 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:36 Download gff for
UFO05760.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gs2-RB | 224..1226 | 1..1008 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:35 Download gff for
UFO05760.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gs2-RB | 224..1226 | 1..1008 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:35 Download gff for
UFO05760.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11429239..11429517 | 726..1008 | 95 | | Plus |
X | 11424282..11424454 | 20..192 | 100 | -> | Plus |
X | 11428529..11428869 | 193..533 | 99 | -> | Plus |
X | 11428982..11429173 | 534..725 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:36 Download gff for
UFO05760.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11318315..11318487 | 20..192 | 100 | -> | Plus |
arm_X | 11322562..11322902 | 193..533 | 99 | -> | Plus |
arm_X | 11323015..11323206 | 534..725 | 100 | -> | Plus |
arm_X | 11323272..11323550 | 726..1008 | 95 | | Plus |