UFO05763.5prime Sequence
1124 bp (989 high quality bases) assembled on 2010-12-10
> UFO05763.5prime
CAGTCGACATGGCTACTTTGGGCGCCTGGGACTACACGATCCTGGCGGTG
GTGCTGATCATCTCCGTTGCGATTGGCATCTACTACCGTTTCGTGGGCGG
CAAGCAGAGCACCACCACCGAATATCTTCTGGCGGATCGTTCCATGAACG
TGGCGCCTGTGGCCTTTAGCCTGATGGCCAGTTTCATGTCGGCCGTCACC
ATATTGGGCGTATCCATGGAGAACTACCAGTACGGTACAATGTTCGTCGT
GATCAATCTGTCGTATGTGTTGTCCACGCCGGTGGCCGCCTACCTCATCA
TTCCGGTCTTCTATCGCCTAAAGACGGCCAGTGTGTACGAGTATCTGGAA
CTGCGGTTTGGCTATGCCACCCGATTGGCCGCCTCGCTGAGCTTCTCGCT
CCAGATGGTCCTATACATGGGCATTGTGGTCTATGCGCCGGCTCTGGCCC
TGGAAGCTGTCACTGGACTGAGCCAGGTCTTCTCCATCGTAATTGTTGGA
GTCGTGTGCACGTTCTATGCGACGCTCGGCGGAATGAAGGCCGTACTCAT
CACGGACATCTATCAGTCGCTCCTCATGTTCGCCGCTGTCTTCAGTGTAA
TCATCTGTGCCTGGGTGAAGGCGGGCAGCTTGGAGGTGATATGGCGCGTG
GCGCAGGAAAACGGACGCATCAATCTGACCAACTTCAGTGTGGATCCAAC
GGAACGTCACACTTGGTTCACCCAGATTTTAGGCGGATGTGCCACCTATT
TGGCCATCTATGGTGTGAATCAAACGCACGTCCAGCGCCTGATGGCGGTG
AAGAGTTTGAGTGCCGCTCGAGCGGCCCTGTGGTGGTGCCTGCCCATTCT
GTGCCTGCTTAATCTGAGCACCTGTTTCTCGGTCTGTGCATCTACTGGTA
CTACCGCGACTGTGACCCGCTGCTGGAAGGTAGAGTCACTCGCGCGATCA
AGTGATGCGCTTCTTTGTTCGTGGACACGATGGGCGATACACCGGGTTGC
TGCCTCTTCGTTTCGGGAATCCTTGGCGCCACTACTCCACCAATTAGTCA
GATAACAGCTGCCTGGCACGGTACCCGGAAGAATTACCTCAAGCCCTTGG
TCACTGCTGTCCAACCAGCGCTCA
UFO05763.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-RA | 2385 | CG32669-RA | 163..1272 | 9..1110 | 4960 | 97.2 | Plus |
| CG10444-RA | 2790 | CG10444-RA | 422..845 | 163..586 | 420 | 74 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10843893..10844919 | 1031..9 | 4710 | 98.3 | Minus |
| 2R | 25286936 | 2R | 20273655..20274078 | 586..163 | 395 | 72.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:18:41 has no hits.
UFO05763.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:27 Download gff for
UFO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 155..1179 | 1..1021 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:54 Download gff for
UFO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 155..1179 | 1..1021 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:52 Download gff for
UFO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 155..1179 | 1..1021 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:52 Download gff for
UFO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10843903..10844924 | 1..1021 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:54 Download gff for
UFO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10737936..10738957 | 1..1021 | 98 | | Minus |
