UFO05765.5prime Sequence
1105 bp (989 high quality bases) assembled on 2010-12-10
> UFO05765.5prime
CAGTCGACATGGCCGGTAGACGCCACCTGCTGCTGATCCTGCTGCTGATC
ATGCAGTTGATCGCCACCACGCCGGCGTCGCGCAGCCTCAGCGTTAATGG
CAACAACATTTGGCGGCGGGTGCGCCTGGTGACCAGCCAGGAATCGGATC
GCAACGCCTACCAGGTGCTTAAGCCGAGTAGCCGTAATGCCACCAGCACC
ACCACTACTACCAGCACGACTACAAGTACTACAAGTAGCACCACTAGTAC
CACTACTCCGGCAGCTCCTCAGACCCAGCGATCTGCCAAACAATTGGATC
TCAATTTTCCGGGTGGCAATGTCTCCAGTGCTGCCCGTCTCGAAATGTCG
ACGGAATTCTTTGTGGTACCCACACTATCGGCCAGCAGTTCTAGCAGCAC
CACGTCCACCACCACACCAGCCACGCCCCGTCGGAGTTCAGGGGCGAAGG
CGCGAGCAGCCGGCACCACTGGACGGGTGACTCCCGGGAGCAGCTCCAAC
AGCACACCGCCCAGTATAGTGTCCACCCACTTGCCCTTCGCGGGACTACG
CAAGGAGCCGTGGGTGGTGCCGGTGCTAGTCCTGGCCACCCTCACCATGC
TCATGATGGCAGCGTTCGAGATCTTTGTGCTCTTCAAGGCCTGGCGGACG
TCCCCGTCGCGTAGGCACCTCTTTCTGGGCCAGATGCTGCTTCTCGGTCT
GTTCGCCTGCGCTAGTTTGGGGGCCATCATCACCGCACAGCCCTCGTTGA
TCAGTTGCGGGGCCATCCGCTTCGGAGTGGGCGTGGCCTACGCCCTGGTC
TTTGCCGCCCTGCTGGTCAAATGCGTATTTCTGATTAGTCTAAATGGAGG
GTGTATCTGCCGGCTCCATACCAGGATTGCTGCTCCTCTTTGCGCTGCTC
ATCCAGGTAGCGATCGGAGGGCAGTGGCTGCTCACCCAACCACCGGAGGT
AATACACCACCGTGGTGCCTGTGATGGCAGTGGCTTCTTAACACCACGTG
GCTCCAAGACCACTACTTCGGGCACTGTTTTTACCCACGTTCCTCACAAC
GCTTGGACGGGACTCCGAGATCTACCCGGATACGCGGTTTAAGCACCGAC
TAATA
UFO05765.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32447-RD | 4928 | CG32447-RD | 213..1316 | 9..1105 | 4930 | 97.5 | Plus |
| CG32447-RC | 3800 | CG32447-RC | 213..1316 | 9..1105 | 4930 | 97.5 | Plus |
| CG32447-RB | 2989 | CG32447-RB | 213..1316 | 9..1105 | 4930 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21705173..21706153 | 987..9 | 4665 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:18:44 has no hits.
UFO05765.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:28 Download gff for
UFO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32447-RB | 189..1278 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:55 Download gff for
UFO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32447-RB | 207..1296 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:54 Download gff for
UFO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32447-RB | 207..1296 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:54 Download gff for
UFO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21705070..21706159 | 1..1087 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:55 Download gff for
UFO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21698170..21699259 | 1..1087 | 97 | | Minus |
