UFO05767.5prime Sequence
1130 bp (1019 high quality bases) assembled on 2010-12-10
> UFO05767.5prime
CAGTCGACATGGCAAACATTGGTCGTTACATAGAAAGAAATCCGGGAATA
CGGGCTGCAGGATTGACATCGACCGTGCAATTTAATGGGGCCAAGGATTG
TCTGTTCGTCGTGAGTTTGGAGGAGGAGGCCGAGGATCGTATAAGGGCTC
TGTGTCGTAGAAGTCGACCCAAACCAGCCAAACGAACTCCCAAGCTGCCC
ACCCATCAAATAGGTGACATTCTCAATAATGAAAATCCGGGACTCTTTGC
CGAGCTTCAAAATAAATTTCGCGAGAATATGTTCCATAAAAAGCCCGGTT
TGGGCGAAGCAAGAGAAACTAACTCAAAACCGAGCTATGTAACGAATTTG
AGTCACACCTTTGGTAAAATCACGCAATCAAATTGCAATGATTCTTTGTA
CTCTATCGTCCTGCCACCAAAATCAGCCGAGCAGGTCAATCGAGAGTATG
GCGAATACCATGATAAACATATTATCAGTCATAATCACTACTTTCCCGCC
GAACAGATTAATCGCAGATACTCAAAGCCCTTCAATCGTTTTAATACTTT
CGGCTTGCCACCGACTCTCGATCCTTCAGGTATCAAGATGAAACACTGCT
TGGAGGAGGGTGAGGAGCACTTGAAAATAGTCAAAAAACCCCAAAAGGAC
ATTGACGATCGCACTAAAGGACCTTTGGGCAAAAAGTATTCGTGGTATCC
CTACCAGATACCCGAAAATATGACCTTTGGTCGCACGCTGCCTCGGGAAA
CCGATGTCCGATCTCTGCTAGAATACACCTCACCCTCCATAAAGTCCGAG
AAATTAGCGATTGCCGTGAGTCACCTAAATATGCTGCGCAAAATGCTCCA
GGAGCGGGACGACTTTAATATGAACCAGTGATCTCGGCTTTGGGAAAAAG
GATACGAGGGGCAGCGTCAACTGCCACTGGACGAGGTCATTAACGTGTGC
ACAGCTAGTATTCCGGCAGATGCGGAAAAAGATTCGCACGCTGCGTCCCA
CTTTCAGTTGTTGTGGACGAGGGATGCTGCTCGGAAGGTGAATACGAGAA
CTATGCAATCTCTTTCGATCTGATCTCTGCCTGATGATCATACCCAATGC
AGTGACGTTAAAGATCGCTATCTCAGTGGG
UFO05767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33490-RA | 1745 | CG33490-RA | 63..1150 | 9..1081 | 5025 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11574093..11574601 | 517..9 | 2545 | 100 | Minus |
| 3L | 28110227 | 3L | 11573445..11573796 | 1036..692 | 1315 | 97.5 | Minus |
| 3L | 28110227 | 3L | 11573855..11574032 | 693..516 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:18:51 has no hits.
UFO05767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:29 Download gff for
UFO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33490-RA | 55..1127 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:00 Download gff for
UFO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33490-RA | 55..1127 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:58 Download gff for
UFO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33490-RA | 55..1127 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:58 Download gff for
UFO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11573415..11573796 | 692..1062 | 96 | <- | Minus |
| 3L | 11573857..11574030 | 518..691 | 100 | <- | Minus |
| 3L | 11574093..11574609 | 1..517 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:00 Download gff for
UFO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11566515..11566896 | 692..1062 | 96 | <- | Minus |
| arm_3L | 11566957..11567130 | 518..691 | 100 | <- | Minus |
| arm_3L | 11567193..11567709 | 1..517 | 99 | | Minus |
