UFO05769.5prime Sequence
1101 bp (995 high quality bases) assembled on 2010-12-10
> UFO05769.5prime
CAGTCGACATGTCGCAGACAGCATCCACAACGCAAAGTGTAACCGCTGCA
CCGGCGGGTGGCAGCAGACGCAATGAAGTGGGCGGCGTGGGCGTCATCGG
GACCACCATGTCGGCTAGATATGGAGAAACAGAATGGGAGGCTCGGGAGT
CCCAGCGGCAGAGGGAACTGCACGAAGCTCGAGCACGGGCGGCGCAGATG
GAGAAAACCATGAAGTGGTGGTCCGACTGCACTGCCAACTGGCGGGAGAA
GTGGAGTAAGGTCCGCAACGAGCGGAATAAGGCCAGAGAGGAGTCCAAGC
AGCTGAGCCTCAAACTGGACGGCGTCATGAAGGAGGCCCACTCGCTGAAG
CGGGAGAAGAACGATCTCGAGTTGCAGATCACGCAGCTAAAGAAGGAGAT
GGAGAAAGTGCACACGCTGATGATGAAGCACGCCGGTCAGTTCCATCGAG
CCGACACCAGCGAGGATGCGGAGGCCAACGGACGGGATGCCAACTGCTCG
CCGGATATCTCCTCGGATGGCTTAAAGAATATCAATAGCGAGGACGGCTT
GGTTACCAAGCTGCCCAATGATGTCAAGGATCTAGACATTGAGGAGTTCG
CTATGAAGGGGGCTATGCCCAAACATCTGACCGAGTTGGACGAAGCGGCG
GCTGCCGAGGAGAAGCGCCTGATTCAGCAATTGTCAAAGGATGACTTTGA
CGAAGACTACTTGCTGCAAAAGATATCCATGCTGCAATTGCGCCTCGACG
AGGCTCAGAAAACTCTTCAAGCGGAAAGGGACGAAAAGCTGGAGCTGCAC
AAGAGCATTGAGAAACTGACGCTGGAGATCCAGGACGTGCGCGGACGTCA
AGAGGAGATGCGCTCGGCCAAGCACGAGGCAGTGCGTGAACTATTAACTC
TTCAGGAACAACATCGTGCTGAGATGCGTATCGTGAATACTCGCTGCAGG
AGGAGATTGCTGCCGTGAGAATCTCGAGCGCCGCCTCACGAGCTTCGCAT
TGACTGGGAGCACCTTCAGGCGGAAAACGCCTCCGATGGGGCCAGCGCGA
GCGACTGGATCAAATTGGCATGAGCGTGACACAAGAAACTGGCCGCAACT
G
UFO05769.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31638-RB | 2587 | CG31638-RB | 175..1269 | 9..1091 | 5085 | 98.3 | Plus |
| CG31638-RA | 3212 | CG31638-RA | 175..1269 | 9..1091 | 5085 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6491682..6492204 | 259..781 | 2615 | 100 | Plus |
| 2L | 23513712 | 2L | 6492260..6492463 | 782..983 | 890 | 98 | Plus |
| 2L | 23513712 | 2L | 6491235..6491375 | 9..149 | 705 | 100 | Plus |
| 2L | 23513712 | 2L | 6491433..6491507 | 148..222 | 375 | 100 | Plus |
| 2L | 23513712 | 2L | 6491567..6491609 | 220..262 | 215 | 100 | Plus |
| 2L | 23513712 | 2L | 6492527..6492597 | 990..1059 | 215 | 90.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:18:54 has no hits.
UFO05769.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:30 Download gff for
UFO05769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31638-RB | 107..1168 | 1..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:02 Download gff for
UFO05769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31638-RA | 168..1229 | 1..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:00 Download gff for
UFO05769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31638-RA | 168..1229 | 1..1059 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:00 Download gff for
UFO05769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6491228..6491375 | 1..149 | 97 | -> | Plus |
| 2L | 6491435..6491505 | 150..220 | 100 | -> | Plus |
| 2L | 6491568..6491607 | 221..260 | 100 | -> | Plus |
| 2L | 6491684..6492204 | 261..781 | 100 | -> | Plus |
| 2L | 6492260..6492463 | 782..983 | 98 | -> | Plus |
| 2L | 6492520..6492597 | 984..1059 | 91 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:02 Download gff for
UFO05769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6491228..6491375 | 1..149 | 97 | -> | Plus |
| arm_2L | 6491435..6491505 | 150..220 | 100 | -> | Plus |
| arm_2L | 6491568..6491607 | 221..260 | 100 | -> | Plus |
| arm_2L | 6491684..6492204 | 261..781 | 100 | -> | Plus |
| arm_2L | 6492260..6492463 | 782..983 | 98 | -> | Plus |
| arm_2L | 6492520..6492597 | 984..1059 | 91 | -> | Plus |
