UFO05771.5prime Sequence
1102 bp (988 high quality bases) assembled on 2010-12-10
> UFO05771.5prime
CAGTCGACATGTCGCTGATACCGTTCATACTAGATTTGGCCGAGGAGCTG
CACGATTTCAATCGCAGCCTGGCAATGGATATAGATGATTCGGCCGGATT
CGGGTTGTATCCACTGGAGGCCACCTCACAGTTGCCACAGCTGAGTCGTG
GGTTGGGGCGTGGGAATGCAATGATGTGGGTGCCCATCAAGGGTCAGTCG
GCGGCATCGCAGCATCGCCATCATCCGTACAATCGTGTGGCCGGAGCCAA
GACTGCTTGCTGCAATAAGTCGCTGGTGGAGCTGGAAAAGGAATTGGGCG
ATAAGGGCACGTCCGGGGCAAGCGGCAGCACCAGTGGCCAACCGGCGGCC
AGCAAATCCGCCTACTCCGTGGTGAATAGGAACGGCTTCCAGGTGAGCAT
GAATGTGAAGCAGTTCGCCGCCAACGAACTGACCGTCAAGACCATCGATA
ACTGCATCGTGGTCGAGGGTCAGCACGACGAGAAGGAGGATGGCCACGGG
GTGATCTCGCGCCACTTCATCCGCAAGTACATCCTGCCCAAGGGCTATGA
TCCCAACGAGGTGCACTCGACCCTCTCCTCGGACGGCATTCTGACGGTGA
AGGCGCCGCCACCACTTCCAGTCGTCAAAGGCAGCCTGGAACGACAGGAG
CGCATCGTAGACATCCAGCAGATATCGCAGCAGCAGAAGGATAAGGATGC
GCAGCCGCCAAAGCCGTCAGAGGTAGAGCAGCAGGCGGCAGCTAGTGCCA
CCACTTCCACTTTAAATCCGACTGCACCCACACCCACTCCTTCGCTCTCG
CTCACTCTCGCCGAGAGCAACGGCAACGGTCAGAAGAGACAGAGATGGGA
AATGCCGGCTGTTTCGCCCCCCATTTCCAATGAGCTGCTGCTGCCGCTGC
TGTTGCAGTGGAGGCCCCTTCCACCGCAGGAACCACCTTCCAGTGCCAAC
AATGGCGTTGCAGAACCAGAAATCAAAGTCCATGAAGTGCCGTTGCCCAA
AACGAAAAGACTGCCATGTGATGATCCCACCCCCATTCCGTATACCATCG
AGAGACAAAGGCCAGGATGCATGCCACGAATGCCGTGCCTCTGATACGCA
AT
UFO05771.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Ba-RA | 1733 | CG4167-RA | 96..1129 | 9..1039 | 4840 | 98.4 | Plus |
| Hsp27-RB | 1632 | CG4466-RB | 388..566 | 384..562 | 295 | 77.7 | Plus |
| Hsp27-RA | 1220 | CG4466-RA | 388..566 | 384..562 | 295 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9378431..9379439 | 1016..9 | 4635 | 98.8 | Minus |
| 3L | 28110227 | 3L | 9384450..9384628 | 384..562 | 295 | 77.7 | Plus |
Blast to na_te.dros performed 2014-11-26 17:18:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1061..1136 | 678..754 | 112 | 62.3 | Plus |
UFO05771.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:26 Download gff for
UFO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Ba-RA | 88..1120 | 1..1030 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:47 Download gff for
UFO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Ba-RA | 88..1120 | 1..1030 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:46 Download gff for
UFO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Ba-RA | 88..1120 | 1..1030 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:46 Download gff for
UFO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9378429..9379446 | 1..1018 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:47 Download gff for
UFO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9371529..9372546 | 1..1018 | 98 | | Minus |
