UFO05772.5prime Sequence
1078 bp (981 high quality bases) assembled on 2010-12-10
> UFO05772.5prime
CAGTCGACATGATACCTATTCTGGAGAAACTCAGCGGGTTCTACAACACC
TACGTCTTGGCCGTACTCACCATTGGTTATATCCTGGGCGAATTGGGTCA
CTATCTGATCGGAGTGACCTCCAAGCAGACGGCCATTGAGTTGGACTACG
GTGATCATGCCTGCCAGCAGAACACCTCGATGTTCAATCGCCACGAGTTG
CCCACCCAGTGCTCGGCGGTTATGAATGAGACCAGCTGCTATGCCCTTGA
TTTCAACGGCACTGGCTATTGCGAGTGGAACTACAATGGACTGGGCATCG
ACTACCAGATCCTGGCCGGACCCACCTTCATCCTGATTTTCACCATCGCC
GGCGTATTTATGGGCTTCGCAGCGGACAAGTACAATCGCGTCAACATGCT
GACTGTGTGCACAGTGATCTTCGGCATTGCCATGATTCTGCAGGGCACCG
TTAAGGAATACTGGCAGCTGGTAATTTTGCGTATGATCATGGCAGCCGGC
GAGTCGGGTTGCAATCCCTTGGCCACGGGCATTATGTCCGATATCTTTCC
GGAGGATAAGAGAGCACTAGTCATGGCCATCTTCAACTGGGGAATTTATG
GAGGATATGGAATCGCCTTCCCCGTGGGTCGCTACATCACCAAGCTGAAT
TTCTGGAATCTGGGATGGCGCGTTTGCTACTTGGGCGCCGGTGTCCTTAC
CGTAATTATGGCCGCACTGACCGGAACCACTTTGCGGGAGCCGGAGCGCA
AGGCCATCGGTGAGGGTGACCGCCAGACGTCTAGCGGCAAACCAGTGAGC
CTGTGGCAAGTTATCAAGAATCCGGCAATGATCATGTTGATGATTGCCGC
GTCCATCCGTCACTGCGGTGCATGACCTTTGCCTACACGCCGATCTCTAC
TACAACACGTACTTCCCCGACGTGACTTGGGCTGGTGGCTCTTTGGGGTC
ACCATTGCATGCAGCGTGGGTTGTGGTCGTCGGTGGCATTGGTGTCCGAC
AGATGTCGCAGATGGGCATCGATCACCGCGCTTTGATGCCTGTAGCAGCT
AATGCCACTACAGCCTTCGGATCGGTGA
UFO05772.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14439-RC | 2296 | CG14439-RC | 380..1464 | 9..1076 | 4865 | 97.7 | Plus |
| CG14439-RB | 2428 | CG14439-RB | 512..1596 | 9..1076 | 4865 | 97.7 | Plus |
| CG14439-RA | 2096 | CG14439-RA | 180..1264 | 9..1076 | 4865 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6753776..6754763 | 9..991 | 4630 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:18:34 has no hits.
UFO05772.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:26 Download gff for
UFO05772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14439-RC | 375..1362 | 9..991 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:49 Download gff for
UFO05772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14439-RA | 180..1167 | 9..991 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:47 Download gff for
UFO05772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14439-RA | 180..1167 | 9..991 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:47 Download gff for
UFO05772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6753776..6754763 | 9..991 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:49 Download gff for
UFO05772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6647809..6648796 | 9..991 | 99 | == | Plus |
