UFO05773.5prime Sequence
1119 bp (1003 high quality bases) assembled on 2010-12-10
> UFO05773.5prime
CAGTCGACATGTTTCCGAAAAGTCCACGAATTCGCCAGGTCAACCAGGCT
GGTTTGACCAGAATCCCTCAGAAGGGATCGCCCAGAACCCTTTACTCCAA
ATCACTTCTTTCTGCACAGGCAAAGAAGCGCCGCATTTTGGGACAGCGGA
ACTTGAAGAAGGATAATGCCTCAGTAGACAAAAACAAGCAACAGTTGCAA
AAAATACCCGAGACGGGCCTACTCACACCCTCCTCCTCGGACAACTCCTT
GACCACCACAGGGTCTAGCTCTGGCCAATCTAGCTGTTCGGCTATGGCAA
AGACCAGTTTGCTCCGAGAGCCCACCTCCTTGACCCCCTATTTGACTCTC
AAGCGTCAGCAGACCTCGACATTGATTAATTTTCGGGTGCGCAAATCGCT
TTCTCAAATGGATTTCAAGGAGGCGCGTCGCACGGGAAACTATCAGTTGG
TGGCCCATGTGGGATCGCCCAGAAAGTCTGTTCAGCAAATGTCGCAGAAA
GTCGATGGCGATTTGGGATTGGAGGCCAATATGGCCAAGTTGCTGCTTCA
GGACAATGCACTAATTGAAGGTGAGATGAGCTTTGTGGTCGGTCCAGATC
AGGATGCCCGAGTGGCCAGCTTGAGAATCTTTAACACCATTATGCTACAC
GCTTGGCGCAGGAGGCGGGAGGAGGTTCGTCAGCTGACCGATCAGGTGGA
GGACTACAAGAAAAGTTTGGTTAAAAATCGCAACCAATTGCATGTCTACA
ATTCGCTCTTCTCCGTGGAGAAGCGTCGCAATGAAACCTTAAATGATCAG
CTTAGCAGTCCTATCGCGAAAATGCTCAGACGAAACTCTCCTACGAGGAA
CTAAATGCCGTGCTGGTGCAGATCAGAAACGAAAAGGAGAAGCTTGCCGA
AGAGGTGGCAACCAAGGATCGGGATATTGAGAATCTCCAGGAAATGCAGC
AGCAACTGAAGAGCGAACTCTTTCAGGTGCATGGCCAACAGGACAGCAGC
TTGAAGATTGACCGGTGCAGGCGAGTACCAGAAGCCAAACGCTCAGATGA
ACTGCTCCGCCAACTGAATCTGCTCCGAAATCGACTGGGCCCTAGAGTGA
CTTGTTGAACCGTACGCAC
UFO05773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5043-RA | 1758 | CG5043-RA | 113..1224 | 9..1108 | 5155 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17434198..17434744 | 170..716 | 2720 | 99.8 | Plus |
| 2L | 23513712 | 2L | 17434803..17435175 | 717..1079 | 1395 | 96 | Plus |
| 2L | 23513712 | 2L | 17433974..17434134 | 9..169 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:20:42 has no hits.
UFO05773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:49 Download gff for
UFO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5043-RA | 109..1218 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:28:18 Download gff for
UFO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5043-RA | 109..1218 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:59 Download gff for
UFO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5043-RA | 109..1218 | 1..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:59 Download gff for
UFO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17433970..17434134 | 1..169 | 97 | -> | Plus |
| 2L | 17434198..17434744 | 170..716 | 99 | -> | Plus |
| 2L | 17434803..17435201 | 717..1104 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:28:18 Download gff for
UFO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17434803..17435201 | 717..1104 | 95 | -> | Plus |
| arm_2L | 17433970..17434134 | 1..169 | 97 | -> | Plus |
| arm_2L | 17434198..17434744 | 170..716 | 99 | -> | Plus |
