UFO05777.5prime Sequence
1089 bp (980 high quality bases) assembled on 2010-12-10
> UFO05777.5prime
CAGTCGACATGGTGCTGGATCTGGATCTGTTTCGCAGCGACAAGGGGGGC
AACCCGGACCTCGTGCGCGAAAATCAAAAGAAGCGCTTCAAGGATGTGGC
GCTGGTGGAGACTGTGATCGCCAAGGATACGGAGTGGCGTCAGTGCCGCC
ACCGTGCCGACAACCTGAACAAGGTCAAGAACGTCTGCAGCAAGGTGATC
GGCGAGAAGATGAAGAAGAAGGAGCCGGTTGGTGCCATGAGCGAGGACCT
GCCCGCAGACGTGACCAAGGACCTCACAGAGATTGTAGCCGAGACACTGC
AGCCGTTGACCGTCAACCAGATCAAGCAGCTACGCGTTCTCATCGACGAC
GCAATGACCGAGAACCAGAAGTCGCTAGAGCTTGCCGAGCAGACGAGGAA
CACCTCACTGCGGGAGGTGGGCAACCACCTGCACGAGTCCGTGCCTGTGT
CTAACGACGAGGACGAGAACCGCGTGGAGCGCACCTTTGGCGACTGCGAA
AAGCGCGGCAAGTACTCGCATGTGGACCTCATCGTGATGATCGACGGCAT
GAACGCGGAGAAAGGAGCCGTGGTGTCCGGCGGACGTGGTTACTTTCTTA
CCGGAGCCGCAGTCTTTTTGGAGCAGGCTCTTATCCAGCACGCTCTGCAC
CTGCTGTACGCCCGTGACTACGTTCCCCTGTACACGCCCTTCTTCATGCG
AAAGGAGGTAATGCAGGAGGTGGCCCAGCTGTCACAGTTCGACGAGGAGC
TCTACAAGGTGGTGGGCAAGGGCAGCGAGAAGGCGGAGGAGGTGGGCATC
GATGAGAAGTACCTGATCGCCACCTCAGAGCAGCCTATCGCCGCCTACCA
TCGGCGATGAATGGCTACCGGAGTCTTCGCTGCCCATTAAGTATGCTGTC
TGTCCACCTGCTTCGACAGGAAGTGGGCTCGCACGGACGCGACACTCGCG
GCATTTTCCGCGTCCACCCAGTTCGAGAAGGGGGGCAGTTCGTACTGACC
TCCCCACACAACAACAGTCTGGGAGGAATGATGGAGCAAAGATCGGGAAT
GGGAACATTCTGCCGGTGGCTGGCCATTCCTATCGCGTG
UFO05777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17259-RB | 1771 | CG17259-RB | 114..1198 | 9..1088 | 4995 | 98 | Plus |
| CG17259-RA | 1911 | CG17259-RA | 254..1338 | 9..1088 | 4995 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3036142..3037150 | 1016..9 | 4775 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:19:03 has no hits.
UFO05777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:31 Download gff for
UFO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17259-RA | 254..1281 | 9..1035 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:10 Download gff for
UFO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17259-RA | 254..1281 | 9..1035 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:05 Download gff for
UFO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17259-RA | 254..1281 | 9..1035 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:05 Download gff for
UFO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3036123..3037150 | 9..1035 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:10 Download gff for
UFO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3036123..3037150 | 9..1035 | 98 | | Minus |
