UFO05780.5prime Sequence
1073 bp (943 high quality bases) assembled on 2010-12-10
> UFO05780.5prime
CAGTCGACATGGAACGCCTCCCAGCTTCCGCCTGCCTAATCTTTGTCACC
TTGGCCGTCGGTTCATTGGCCATCCAGGGTGGAGTCTTCAAGGAGCTAAC
CACGCCTCTGGGTCAGCAGATCATGCGTATAGCCAAGTCGGCGGAGATGT
GCTCCTTTATGGACACCTCTGTGAGTCCCTGCGACGATTTCTATGGCTAT
GCCTGCGGGAATTATGCGACAATAAATGCGGCAACCTCGCAGAAAGACAC
CAATATCCGGCAGCTTATGTTTGCCAACTATCTGCGTCGGGTGAGGCAGG
TGCTTAACGAGCCCCGGATAAGTACAGATCGGCCGATGGAGGTGCGCGTG
AAGTATTTCTACGAATCCTGCCTGGACACAGCGGCTTTAAGGACTAAACA
GCGATCCCATCTGCTCAGTGTTCTAAGGGAGTTTGGTGGAATGCCGGCGG
TGGAGGGCAAGTCCTGGGACTACGTCGGTTTCGACGCCATTGAAATGATG
GCTCAGTTGCTCCGCCGCTACGGAAAGTTGACTCTACTGGGTGTCTATGT
GGTTCCGGATCACTTCAACTCCCAGATTAAACGCCTACAGTTGGGCCAAA
GGCTCGATCTCGCTGAGAGCGATGAGTTTGCCAGTCTGTGGAAGAAGTAT
GCGCTGAAGATGCGTCTGCGGAACCTCCTGGGTCTGTCGGAGGAGCTAGC
TAGAAAGACTGCTGAGGAGATAATAGAGCTGGAGTTGGAACTATCGCGCA
GTGCTTTTGACCATAGAATGAACCGTGATCCGCGACTGATGCGCCATCTG
ACCATGCTGTCCAACATGAGCGATGCTTACGGACCGATTCTTAACGTGAC
TCGCTTTGTGACCTCCTGGGTGGGTTCCGAATACAATCTTTCCGGTTTTG
AATCAGCTCCTAGCTACCTTTTCCAGGTAAAGAAGAATCTTGCTGGCACT
TCCAACACTGTGGGTGCACACTATATTGCTGTCCATCCTGTTGACCGACT
TTGGAAATCACGGCCAATGAAAAGCAACAAAGCGATCTGCCGAGCCGGAT
AGCGAGCTCTTCCGATTGGGGGA
UFO05780.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-RA | 2127 | CG14529-RA | 11..1041 | 9..1039 | 4745 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28872915..28873933 | 9..1029 | 4645 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:19:10 has no hits.
UFO05780.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:33 Download gff for
UFO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 3..938 | 1..936 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:15 Download gff for
UFO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 3..938 | 1..936 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:10 Download gff for
UFO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 3..938 | 1..936 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:10 Download gff for
UFO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28872907..28873842 | 1..936 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:15 Download gff for
UFO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24698629..24699564 | 1..936 | 99 | == | Plus |
