UFO05781.5prime Sequence
877 bp (635 high quality bases) assembled on 2010-12-10
> UFO05781.5prime
CAGTCGACATGATGGGCAACAGAACGGAACGAAGCGGACGACGACTGGGG
ATGATCCTTCTGCTGCTGGGTGTGCTAGTGGTTCTAATGGCCCTACCGCC
GCCCACCGCAGGCACCACCGATTGGATGCAGAGCTGCGGTACATGCCACT
GTCAGTGGAATTCGGGCAAGAAGAGCGCCGACTGCAAGAACAAGGCGCTA
ACCAAAATTCCGCAGGACATGAGCAACGAGATGCAGGTGCTGGACTTTGC
CCACAATCAAATACCCGAGCTGCGGCGCGAAGAGTTCCTACTGGCCGGTC
TGCCCAATGTGCACAAGATCTTTTTGCGCAACTGCACCATCCAGGAGGTG
CATCGCGAGGCCTTCAAGGGTCTGCATATCCTAATCGAGCTGGACCTGTC
GGGCAATCGGATACGGGAACTGCATCCGGGCACTTTCGCCGGCCTGGAGA
AGCTGCGCAACGTGATCATCAACAACAACGAGATCGAGGTGCTGCCCAAC
CATCTGTTCGTCAACCTGAGCTTCCTGTCGCGCATCGAGTTCCGGAACAA
TCGATTGCGCCAGGTGCACCTGCACGTCTTCACTGGCACAATGGCGCTGA
CCGCCATTTCGCTGGAACAGAACCGCCTCTTCACATATGCACAAGGAGAC
ACTCAGGATCTGCATAAGCTGATGCCTTCTATCCGCTGCAGGGTAACGCA
TGGAACTGCAGCTGCGAGCTGCAGGATTTTCGCAACTTTTGCGATCAGCA
AACTCACTACCACCCCCCCACCCAGTGCCAGAACCGCAACAGTTCGCGGG
CAACTGAGGACGAGGGCCTCGGAAACTTCGCCTGCCGCCCGCCCATTTGG
GTTCCGGCGCTCCTTTATCAGGCCCAT
UFO05781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 1125..1997 | 9..874 | 3605 | 95.4 | Plus |
| kek5-RC | 4544 | CG12199-RC | 1258..2130 | 9..874 | 3605 | 95.4 | Plus |
| kek5-RA | 4374 | CG12199-RA | 1088..1960 | 9..874 | 3605 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19464670..19465411 | 9..753 | 3345 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:19:13 has no hits.
UFO05781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:33 Download gff for
UFO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1066..1812 | 1..753 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:17 Download gff for
UFO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1083..1829 | 1..753 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:12 Download gff for
UFO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1083..1829 | 1..753 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:12 Download gff for
UFO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19464665..19465411 | 1..753 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:17 Download gff for
UFO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19358698..19359444 | 1..753 | 97 | == | Plus |
