Clone UFO05787 Report

Search the DGRC for UFO05787

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:57
Well:87
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG34382-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05787.5prime Sequence

1118 bp (990 high quality bases) assembled on 2010-12-10

> UFO05787.5prime
CAGTCGACATGAGAATCCAAATCTTGCTCCTGACACTCTTGCTGGGCCTC
GTCTGCGCCCAGGCCGTGGATGCGGAGGCCAAGAGCAGCCAAGCCAAGCC
AGCGGAAGACAGCAAGAGCTCCGCCTCCACGCCACTGGAATCGGAGGCGA
CCAAAGACAAGCGACAAGTGAGCTCCAAGGAGACGTCTCTGTACCCCAAC
CACCGCAGCTCGGCGGCATCGTCAAGCGCCAACGATGATCCCGAGGATGG
TCAGGAAACCATCTACGGCTCCAAGCCGAATCAGTTCATCATTCGCCCCA
TTGCACCGCACCAGCATCAGCAGCACGAATCGCACCAGGAGCCGCAGTTG
AGGAACTTTGCGGCGGCCAATTCTCGACCCCATGCCGCCCAACTTCTCGA
GCAGAGTCAGGAGGTGCAGCACTACGTGTATCTGCAAGATATAATGCGCC
ATCATCAGCCCAAGGCCCTGCTGGCCGCAGGTCAAGGCAAGGGTGCGGCC
AGTGCGCCCAAGAAGTCATCCACTCCGGTGGCCGAGGAGGAGCAGGAGCA
GGAACAGGAGGCGGAACAGCGATACGCGGTGTCCATTCAGCCGCAGCCGC
AGCAACAGCTCCAGCTCCAGCAACCACGTCCACGTCAGTACCAGGGTCCC
TATCAACTGCCATTGCCGCTGCCTGCTCCACAGCATCGATCGGTGAATCC
CCAGCAGCAGCAGCAGCAACATCAGCAGCCCTACCAAGTGATTCCCGAAG
AGCAGTTTCTTAAGATCCTGGAGGAGGAGCTGCAGGCTAGAGCCTATCAT
GAGCAACTTCGTCAGCAGCAGCAGCATCACAGCAGCAGCAGCAGCAGCAG
CAACACCAACAGCAGCAGCAGCAACAGCACCACAGGCAACTGCCATCCAC
AGCACGGCTGCCACTTCAAAAGGTTGTTGCAGCAGGCGGATCCCCTCGCT
AGGATTAGGCGGCTATCGCGAGCGTTTTGTGACGAGCAGGAACTGGTGAC
ACCAAACTTTATCGCACTCCCCGCGGTGGATCCCAAATATCTTGGCCCTT
GCCAAGGGCGCAGCAATCGCAAGAAGAATGAATGAGCAACAACAGACATA
CACCCGCAAGCGGGTGCA

UFO05787.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG34382-RE 2864 CG34382-RE 329..1428 9..1118 4965 97.4 Plus
CG34382-RC 3091 CG34382-RC 556..1655 9..1118 4965 97.4 Plus
CG34382-RF 2858 CG34382-RF 329..1422 9..1118 4865 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9880205..9880576 45..416 1860 100 Plus
3L 28110227 3L 9882300..9882616 412..728 1585 100 Plus
3L 28110227 3L 9882676..9883010 727..1066 1085 93.9 Plus
3L 28110227 3L 9879540..9879577 9..46 190 100 Plus
Blast to na_te.dros performed 2014-11-26 17:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6728..7132 588..986 306 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2337..2665 588..921 278 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2654 588..922 209 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6923 535..726 195 58.5 Plus
roo 9092 roo DM_ROO 9092bp 1065..1160 535..630 164 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2766..2889 600..723 134 56.5 Plus
roo 9092 roo DM_ROO 9092bp 1085..1154 588..657 116 62.9 Plus

UFO05787.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:35 Download gff for UFO05787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34382-RC 550..1654 1..1117 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:27:24 Download gff for UFO05787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34382-RC 550..1654 1..1117 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:17 Download gff for UFO05787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34382-RC 550..1654 1..1117 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:56:17 Download gff for UFO05787.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9882302..9882616 414..728 100 -> Plus
3L 9879534..9879576 1..45 91 -> Plus
3L 9880206..9880573 46..413 100 -> Plus
3L 9882678..9883056 729..1117 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:27:24 Download gff for UFO05787.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9875778..9876156 729..1117 92   Plus
arm_3L 9872634..9872676 1..45 91 -> Plus
arm_3L 9873306..9873673 46..413 100 -> Plus
arm_3L 9875402..9875716 414..728 100 -> Plus